RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 PYURFQ96I23 114 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 ALKBH3Q96Q83 286 aaPredicted RBP3.08□□□□□ -1.92
UBR3-209ENST00000477461 MCHR1Q99705 422 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 FAM173AQ9BQD7 235 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 ZNF559Q9BR84 538 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 DOHHQ9BU89 302 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 ANGPTL4Q9BY76 406 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 ADNPQ9H2P0 1102 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 DSN1Q9H410 356 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 MOB1AQ9H8S9 216 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 TMEM27Q9HBJ8 222 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 RAB9BQ9NP90 201 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 DCAF13Q9NV06 445 aaKnown RBP3.08□□□□□ -1.92
UBR3-209ENST00000477461 DKKL1Q9UK85 242 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 BOKQ9UMX3 212 aaPredicted RBP3.08□□□□□ -1.92
UBR3-209ENST00000477461 SH3GLB1Q9Y371 365 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 TMED7Q9Y3B3 224 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 RRP15Q9Y3B9 282 aaKnown RBP3.08□□□□□ -1.92
UBR3-209ENST00000477461 AP4S1Q9Y587 144 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 WIF1Q9Y5W5 379 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 CHCHD2Q9Y6H1 151 aaPredicted RBP3.08□□□□□ -1.92
UBR3-209ENST00000477461 DSPPQ9NZW4 1301 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 HEATR5AQ86XA9 2040 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 FREM3P0C091 2139 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 PTPRQQ9UMZ3 2332 aa3.08□□□□□ -1.92
UBR3-209ENST00000477461 VCANP13611 3396 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 A0A087WZY1 265 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 TCRBV3S1A0A5B6 114 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 CLDN24A6NM45 220 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 CPSF4LA6NMK7 179 aaKnown RBP3.07□□□□□ -1.92
UBR3-209ENST00000477461 SRRM4A7MD48 611 aaKnown RBP3.07□□□□□ -1.92
UBR3-209ENST00000477461 hCG_2039718K7EN88 272 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 NME2P1O60361 137 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 TPST1O60507 370 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 CDC40O60508 579 aaKnown RBP eCLIP3.07□□□□□ -1.92
UBR3-209ENST00000477461 ENTPD5O75356 428 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 E2F6O75461 281 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 GCM2O75603 506 aaPredicted RBP3.07□□□□□ -1.92
UBR3-209ENST00000477461 CBR3O75828 277 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 TRAPPC6AO75865 159 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 GLCEO94923 617 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 BAG2O95816 211 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 LGI1O95970 557 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 CST1P01037 141 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 GKN3PP0CG01 181 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 CXCR1P25024 350 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 FASP25445 335 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 DPP4P27487 766 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 GDF1P27539 372 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 OR1E2P47887 323 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 IDH2P48735 452 aaKnown RBP3.07□□□□□ -1.92
UBR3-209ENST00000477461 TNFSF10P50591 281 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 ARHGDIAP52565 204 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 DSCR4P56555 118 aaPredicted RBP3.07□□□□□ -1.92
UBR3-209ENST00000477461 SMIM11AP58511 58 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 ACTR3P61158 418 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 BTG1P62324 171 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 SPIBQ01892 262 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 ZNF117Q03924 483 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 SKP2Q13309 424 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 CD226Q15762 336 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 MAPK14Q16539 360 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 C3AR1Q16581 482 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 NRF1Q16656 503 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 DUSP7Q16829 419 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 NDUFAF6Q330K2 333 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 RAET1LQ5VY80 246 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 AP1ARQ63HQ0 302 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 OR5M10Q6IEU7 315 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 OR2T5Q6IEZ7 315 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 IGFL2Q6UWQ7 119 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 IGFL3Q6UXB1 125 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 VTCN1Q7Z7D3 282 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 SLC22A16Q86VW1 577 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 PLCZ1Q86YW0 608 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 GRAMD2AQ8IUY3 354 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 FGFRL1Q8N441 504 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 MDS2Q8NDY4 140 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 CATSPER1Q8NEC5 780 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 OR2M7Q8NG81 312 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 GPR32P1Q8NGA4 272 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 OR2T29Q8NH02 315 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 OR5W2Q8NH69 310 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 CANT1Q8WVQ1 401 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 PYDC1Q8WXC3 89 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 ST8SIA1Q92185 356 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 PRRC1Q96M27 445 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 SIGLEC12Q96PQ1 595 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 ARHGDIGQ99819 225 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 CHID1Q9BWS9 393 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 POLR2J2Q9GZM3 115 aaKnown RBP3.07□□□□□ -1.92
UBR3-209ENST00000477461 POLR2J3Q9H1A7 115 aaKnown RBP3.07□□□□□ -1.92
UBR3-209ENST00000477461 PRORYQ9H606 182 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 EXO5Q9H790 373 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 REEP1Q9H902 201 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 JPT2Q9H910 190 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 S100A14Q9HCY8 104 aa3.07□□□□□ -1.92
UBR3-209ENST00000477461 EXOSC3Q9NQT5 275 aaKnown RBP3.07□□□□□ -1.92
UBR3-209ENST00000477461 CTPS2Q9NRF8 586 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms