RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 WDR45Q9Y484 360 aa2.07□□□□□ -2.08
XRN1-211ENST00000477237 RBM7Q9Y580 266 aaKnown RBP2.07□□□□□ -2.08
XRN1-211ENST00000477237 MTCH2Q9Y6C9 303 aa2.07□□□□□ -2.08
XRN1-211ENST00000477237 SIGLEC1Q9BZZ2 1709 aa2.07□□□□□ -2.08
XRN1-211ENST00000477237 ANKRD26Q9UPS8 1709 aa2.07□□□□□ -2.08
XRN1-211ENST00000477237 NEDD4P46934 1319 aa2.07□□□□□ -2.08
XRN1-211ENST00000477237 N4BP2Q86UW6 1770 aaPredicted RBP2.07□□□□□ -2.08
XRN1-211ENST00000477237 KIF20BQ96Q89 1820 aa2.07□□□□□ -2.08
XRN1-211ENST00000477237 TNS3Q68CZ2 1445 aa2.07□□□□□ -2.08
XRN1-211ENST00000477237 DENND4BO75064 1496 aaPredicted RBP2.07□□□□□ -2.08
XRN1-211ENST00000477237 BCL9LQ86UU0 1499 aa2.07□□□□□ -2.08
XRN1-211ENST00000477237 ZMYM4Q5VZL5 1548 aa2.07□□□□□ -2.08
XRN1-211ENST00000477237 CLASP1Q7Z460 1538 aa2.07□□□□□ -2.08
XRN1-211ENST00000477237 LRRC7Q96NW7 1537 aa2.07□□□□□ -2.08
XRN1-211ENST00000477237 PREX2Q70Z35 1606 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 PHLPP1O60346 1717 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 A0A1B0GUL6 1792 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 CACNA1SQ13698 1873 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 A0A1B0GUS0 222 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 TMEM150BA6NC51 233 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 CENPXA8MT69 81 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 HIDE1A8MVS5 230 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 SEC14L6B5MCN3 397 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 ZNF878C9JN71 531 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 FTCDNL1E5RQL4 147 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 PPP5D1E7EU14 171 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 TRAPPC2LH3BP13 241 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 J3QLI3 93 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 GPR31O00270 319 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 PPIHO43447 177 aaKnown RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 CHST1O43916 411 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 TPST1O60507 370 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 CDC40O60508 579 aaKnown RBP eCLIP2.06□□□□□ -2.08
XRN1-211ENST00000477237 HPGDSO60760 199 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 PRAF2O60831 178 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 ZNF217O75362 1048 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 LYPLA1O75608 230 aaPredicted RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 FCN3O75636 299 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 HPRP00739 348 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 IGHV3-13P01766 116 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 IGHV2-5P01817 119 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 CD74P04233 296 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 ALDOBP05062 364 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 ARG1P05089 322 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 CTSLP07711 333 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 DANCRP0C864 163 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 HIST1H1EP10412 219 aaKnown RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 LIPCP11150 499 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 IL7P13232 177 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 CYBAP13498 195 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 HIST1H1CP16403 213 aaKnown RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 ZNF43P17038 809 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 IL1RNP18510 177 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 PMCHP20382 165 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 KITLGP21583 273 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 IVDP26440 423 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 AK4P27144 223 aaPredicted RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 GDF1P27539 372 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 GABRR2P28476 465 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 SSTR1P30872 391 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 HPCAL1P37235 193 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 TNFRSF4P43489 277 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 CDX1P47902 265 aaPredicted RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 SLC6A8P48029 635 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 NPBWR1P48145 328 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 NUMBP49757 651 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 CAV2P51636 162 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 ACLYP53396 1101 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 PAX9P55771 341 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 OR2B8PP59922 312 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 UBE2KP61086 200 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 RRAS2P62070 204 aaPredicted RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 SIRPAP78324 504 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 CEACAM7Q14002 265 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 KIAA0141Q14154 515 aaPredicted RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 MAD2L1BPQ15013 274 aaPredicted RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 P2RY6Q15077 328 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 GUCA2BQ16661 112 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 HLA-BQ31612 363 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 GLYR1Q49A26 553 aaPredicted RBP2.06□□□□□ -2.08
XRN1-211ENST00000477237 GGTA1PQ4G0N0 100 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 EIPR1Q53HC9 387 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 SFT2D3Q587I9 215 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 PDZD11Q5EBL8 140 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 LY6G6FQ5SQ64 297 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 GPRC6AQ5T6X5 926 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 AGAP6Q5VW22 663 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 FAM71F2Q6NXP2 309 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 DCUN1D2Q6PH85 259 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 TEX261Q6UWH6 196 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 UGT2A3Q6UWM9 527 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 BTNL8Q6UX41 500 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 CDHR3Q6ZTQ4 885 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 COX15Q7KZN9 410 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 DET1Q7L5Y6 550 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 SSX7Q7RTT5 188 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 NRARPQ7Z6K4 114 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 TMPRSS11BQ86T26 416 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 LINC01551Q86U37 167 aa2.06□□□□□ -2.08
XRN1-211ENST00000477237 AMIGO1Q86WK6 493 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms