RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 CCDC36Q8IYA8 594 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 SLC30A7Q8NEW0 376 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 OR4M2Q8NGB6 313 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 SSC4DQ8WTU2 575 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 SPACA5Q96QH8 159 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 CNTD2Q9H8S5 307 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 ATRXP46100 2492 aa12.5□□□□□ -0.41
COL4A6-206ENST00000477085 INTS1Q8N201 2190 aaKnown RBP12.49□□□□□ -0.41
COL4A6-206ENST00000477085 A8MXE2 369 aa12.49□□□□□ -0.41
COL4A6-206ENST00000477085 TMEM127O75204 238 aa12.49□□□□□ -0.41
COL4A6-206ENST00000477085 APOA1P02647 267 aa12.49□□□□□ -0.41
COL4A6-206ENST00000477085 HOXB1P14653 301 aaPredicted RBP12.49□□□□□ -0.41
COL4A6-206ENST00000477085 HLXQ14774 488 aaPredicted RBP12.49□□□□□ -0.41
COL4A6-206ENST00000477085 RAB11BQ15907 218 aa12.49□□□□□ -0.41
COL4A6-206ENST00000477085 STEAP3Q658P3 488 aa12.49□□□□□ -0.41
COL4A6-206ENST00000477085 XKRXQ6PP77 449 aa12.49□□□□□ -0.41
COL4A6-206ENST00000477085 PGAP1Q75T13 922 aa12.49□□□□□ -0.41
COL4A6-206ENST00000477085 BHLHA15Q7RTS1 189 aaPredicted RBP12.49□□□□□ -0.41
COL4A6-206ENST00000477085 LYSMD2Q8IV50 215 aa12.49□□□□□ -0.41
COL4A6-206ENST00000477085 JAGN1Q8N5M9 183 aa12.49□□□□□ -0.41
COL4A6-206ENST00000477085 SEMA6DQ8NFY4 1073 aa12.49□□□□□ -0.41
COL4A6-206ENST00000477085 ABHD1Q96SE0 405 aa12.49□□□□□ -0.41
COL4A6-206ENST00000477085 REPIN1Q9BWE0 567 aaKnown RBP12.49□□□□□ -0.41
COL4A6-206ENST00000477085 SP140LQ9H930 580 aa12.49□□□□□ -0.41
COL4A6-206ENST00000477085 PLEKHA1Q9HB21 404 aa12.49□□□□□ -0.41
COL4A6-206ENST00000477085 ABCB10Q9NRK6 738 aa12.49□□□□□ -0.41
COL4A6-206ENST00000477085 CRIM1Q9NZV1 1036 aa12.49□□□□□ -0.41
COL4A6-206ENST00000477085 MTRF1O75570 445 aaKnown RBP12.48□□□□□ -0.41
COL4A6-206ENST00000477085 IGKV3-15P01624 115 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 CBR1P16152 277 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 BMP5P22003 454 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 HTR2CP28335 458 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 APLNRP35414 380 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 THBS4P35443 961 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 IDH3GP51553 393 aaPredicted RBP12.48□□□□□ -0.41
COL4A6-206ENST00000477085 GK2Q14410 553 aaPredicted RBP12.48□□□□□ -0.41
COL4A6-206ENST00000477085 OR8B8Q15620 311 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 UBE2NLQ5JXB2 153 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 METAP1DQ6UB28 335 aaPredicted RBP12.48□□□□□ -0.41
COL4A6-206ENST00000477085 FAM3DQ96BQ1 224 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 CHST5Q9GZS9 411 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 RGCCQ9H4X1 137 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 OR5H1A6NKK0 313 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 DHRS7CA6NNS2 312 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 LDLRAD4O15165 306 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 POU3F4P49335 361 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 RIN1Q13671 783 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 IL18Q14116 193 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 TMEM42Q69YG0 159 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 C22orf34Q6ZV56 151 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 RFPL4BQ6ZWI9 263 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 UTS2BQ765I0 119 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 IZUMO1Q8IYV9 350 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 NKAIN3Q8N8D7 197 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 CCDC54Q8NEL0 328 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 OR6M1Q8NGM8 313 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 SYNPRQ8TBG9 265 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 APOBEC3DQ96AK3 386 aaPredicted RBP12.48□□□□□ -0.41
COL4A6-206ENST00000477085 C10orf35Q96D05 121 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 CMTM3Q96MX0 182 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 ABCG5Q9H222 651 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 OR51B6Q9H340 312 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 METTL17Q9H7H0 456 aaPredicted RBP12.48□□□□□ -0.41
COL4A6-206ENST00000477085 MYEF2Q9P2K5 600 aaKnown RBP12.48□□□□□ -0.41
COL4A6-206ENST00000477085 ZNF391Q9UJN7 358 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 ADAM30Q9UKF2 790 aa12.48□□□□□ -0.41
COL4A6-206ENST00000477085 TMEM272A0A1B0GTI8 110 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 MSTNO14793 375 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 XRCC2O43543 280 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 GMDSO60547 372 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 CSF3P09919 207 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 PRF1P14222 555 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 FAM27E3Q08E93 113 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 RIPPLY1Q0D2K3 151 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 PYDC2Q56P42 97 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 OR10K2Q6IF99 312 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 C17orf78Q8N4C9 275 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 NPRL2Q8WTW4 380 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 PP6455Q8WZ26 134 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 AKAP1Q92667 903 aaKnown RBP eCLIP12.47□□□□□ -0.41
COL4A6-206ENST00000477085 S100PBPQ96BU1 408 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 DMRTA2Q96SC8 542 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 MRI1Q9BV20 369 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 CCDC32Q9BV29 185 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 GPR173Q9NS66 373 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 PTTG3PQ9NZH4 202 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 ZNF629Q9UEG4 869 aaPredicted RBP12.47□□□□□ -0.41
COL4A6-206ENST00000477085 ETV7Q9Y603 341 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 SLC25A15Q9Y619 301 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 PKD1L2Q7Z442 2459 aa12.47□□□□□ -0.41
COL4A6-206ENST00000477085 RELNP78509 3460 aa12.46□□□□□ -0.41
COL4A6-206ENST00000477085 LOC100289279A0A1B0GTE1 492 aa12.46□□□□□ -0.41
COL4A6-206ENST00000477085 ALX3O95076 343 aa12.46□□□□□ -0.41
COL4A6-206ENST00000477085 ALDOBP05062 364 aa12.46□□□□□ -0.41
COL4A6-206ENST00000477085 OPRM1P35372 400 aa12.46□□□□□ -0.41
COL4A6-206ENST00000477085 ZNF93P35789 620 aaPredicted RBP12.46□□□□□ -0.41
COL4A6-206ENST00000477085 MAP2K3P46734 347 aa12.46□□□□□ -0.41
COL4A6-206ENST00000477085 PITPNBP48739 271 aa12.46□□□□□ -0.41
COL4A6-206ENST00000477085 QRFPP83859 136 aa12.46□□□□□ -0.41
COL4A6-206ENST00000477085 RBPJQ06330 500 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms