RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 HIST2H3AQ71DI3 136 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 SPATC1Q76KD6 591 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 ZNF676Q8N7Q3 588 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 NANOS1Q8WY41 292 aaKnown RBP13.44□□□□□ -0.26
CPSF3-203ENST00000475482 RPL3LQ92901 407 aaKnown RBP13.44□□□□□ -0.26
CPSF3-203ENST00000475482 SPTSSAQ969W0 71 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 FBXO17Q96EF6 278 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 ATF6BQ99941 703 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 KCNS3Q9BQ31 491 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 DDX28Q9NUL7 540 aaKnown RBP13.44□□□□□ -0.26
CPSF3-203ENST00000475482 TXNL4BQ9NX01 149 aaKnown RBP13.44□□□□□ -0.26
CPSF3-203ENST00000475482 GRIP1Q9Y3R0 1128 aa13.44□□□□□ -0.26
CPSF3-203ENST00000475482 SIRT4Q9Y6E7 314 aaPredicted RBP13.44□□□□□ -0.26
CPSF3-203ENST00000475482 TMEM269A0A1B0GVZ9 245 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 INAFM1C9JVW0 142 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 GABRPO00591 440 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 RER1O15258 196 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 SGCEO43556 437 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 ARL6IP5O75915 188 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 F12P00748 615 aaPredicted RBP13.43□□□□□ -0.26
CPSF3-203ENST00000475482 HLA-HP01893 362 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 OR4A8P0C604 315 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 SOX6P35712 828 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 FABP5Q01469 135 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 DGUOKQ16854 277 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 ZNF525Q8N782 197 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 ABHD4Q8TB40 342 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 HTRA1Q92743 480 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 PGLYRP3Q96LB9 341 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 CENPOQ9BU64 300 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 DCSTAMPQ9H295 470 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 SP140LQ9H930 580 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 PLEK2Q9NYT0 353 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 FRRS1LQ9P0K9 344 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 ATPIF1Q9UII2 106 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 GTF2A1LQ9UNN4 478 aa13.43□□□□□ -0.26
CPSF3-203ENST00000475482 A0A1W2PPW3 197 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 UBL3O95164 117 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 CSF3P09919 207 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 ZNF35P13682 527 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 MYL9P24844 172 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 PSMA6P60900 246 aaKnown RBP13.42□□□□□ -0.26
CPSF3-203ENST00000475482 LOXL1Q08397 574 aaPredicted RBP13.42□□□□□ -0.26
CPSF3-203ENST00000475482 SPCS2Q15005 226 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 GSG1Q2KHT4 349 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 BCL2L15Q5TBC7 163 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 C22orf42Q6IC83 251 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 TMEM53Q6P2H8 277 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 CLEC2AQ6UVW9 174 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 CATSPERDQ86XM0 798 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 C10orf105Q8TEF2 133 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 C4orf45Q96LM5 186 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 SORCS2Q96PQ0 1159 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 KCNJ15Q99712 375 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 SH3GL3Q99963 347 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 DCUN1D5Q9BTE7 237 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 RNF121Q9H920 327 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 OR52A1Q9UKL2 312 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 MALRD1Q5VYJ5 2156 aa13.42□□□□□ -0.26
CPSF3-203ENST00000475482 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.41□□□□□ -0.262e-6■□□□□ 10.1
CPSF3-203ENST00000475482 VWC2LB2RUY7 222 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 ZNF879B4DU55 563 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 CD5LO43866 347 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 DOK2O60496 412 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 ZFPL1O95159 310 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 IL1AP01583 271 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 UBCP0CG48 685 aaKnown RBP13.41□□□□□ -0.26
CPSF3-203ENST00000475482 SLC25A16P16260 332 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 PCSK6P29122 969 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 THBS4P35443 961 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 PPOXP50336 477 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 NANOS3P60323 173 aaKnown RBP13.41□□□□□ -0.26
CPSF3-203ENST00000475482 SNRPD2P62316 118 aaKnown RBP13.41□□□□□ -0.26
CPSF3-203ENST00000475482 ACSM3Q53FZ2 586 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 TMEM244Q5VVB8 128 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 CEACAM19Q7Z692 300 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 PRIMA1Q86XR5 153 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 SKA3Q8IX90 412 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 ZNF283Q8N7M2 679 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 OR10S1Q8NGN2 331 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 FGFBP3Q8TAT2 258 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 GPR148Q8TDV2 347 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 MS4A3Q96HJ5 214 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 TSC22D3Q99576 134 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 PDCD1LG2Q9BQ51 273 aa13.41□□□□□ -0.26
CPSF3-203ENST00000475482 PNRC2Q9NPJ4 139 aaKnown RBP13.41□□□□□ -0.26
CPSF3-203ENST00000475482 FBXO9Q9UK97 447 aaPredicted RBP13.41□□□□□ -0.26
CPSF3-203ENST00000475482 OR6C6A6NF89 314 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 OR4C45A6NMZ5 311 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 CRLF1O75462 422 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 SRSF10O75494 262 aaKnown RBP13.4□□□□□ -0.26
CPSF3-203ENST00000475482 SC5DO75845 299 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 LY6HO94772 140 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 ISG15P05161 165 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 COX5BP10606 129 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 ZNF182P17025 639 aaPredicted RBP13.4□□□□□ -0.26
CPSF3-203ENST00000475482 ZNF32P17041 273 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 TPTEP56180 551 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 RAB1AP62820 205 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 PLP2Q04941 152 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms