RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 OR10AD1Q8NGE0 317 aa12.76□□□□□ -0.37
VARS-223ENST00000474643 OR13G1Q8NGZ3 307 aa12.76□□□□□ -0.37
VARS-223ENST00000474643 OTOSQ8NHW6 89 aa12.76□□□□□ -0.37
VARS-223ENST00000474643 CNN2Q99439 309 aaKnown RBP12.76□□□□□ -0.37
VARS-223ENST00000474643 SLC6A7Q99884 636 aa12.76□□□□□ -0.37
VARS-223ENST00000474643 APOL4Q9BPW4 351 aa12.76□□□□□ -0.37
VARS-223ENST00000474643 MRI1Q9BV20 369 aa12.76□□□□□ -0.37
VARS-223ENST00000474643 ADI1Q9BV57 179 aa12.76□□□□□ -0.37
VARS-223ENST00000474643 TMPRSS13Q9BYE2 586 aa12.76□□□□□ -0.37
VARS-223ENST00000474643 SP140LQ9H930 580 aa12.76□□□□□ -0.37
VARS-223ENST00000474643 DNAJC27Q9NZQ0 273 aa12.76□□□□□ -0.37
VARS-223ENST00000474643 OR5V1Q9UGF6 321 aa12.76□□□□□ -0.37
VARS-223ENST00000474643 RAB26Q9ULW5 256 aa12.76□□□□□ -0.37
VARS-223ENST00000474643 IFNL4K9M1U5 179 aa12.75□□□□□ -0.37
VARS-223ENST00000474643 SELEP16581 610 aa12.75□□□□□ -0.37
VARS-223ENST00000474643 ATP6V1E1P36543 226 aa12.75□□□□□ -0.37
VARS-223ENST00000474643 CAPGP40121 348 aa12.75□□□□□ -0.37
VARS-223ENST00000474643 MDH2P40926 338 aaKnown RBP12.75□□□□□ -0.37
VARS-223ENST00000474643 HILS1P60008 231 aa12.75□□□□□ -0.37
VARS-223ENST00000474643 TMED1Q13445 227 aa12.75□□□□□ -0.37
VARS-223ENST00000474643 KRTAP27-1Q3LI81 207 aa12.75□□□□□ -0.37
VARS-223ENST00000474643 MEDAGQ5VYS4 303 aa12.75□□□□□ -0.37
VARS-223ENST00000474643 FBXW12Q6X9E4 464 aa12.75□□□□□ -0.37
VARS-223ENST00000474643 USP43Q70EL4 1123 aa12.75□□□□□ -0.37
VARS-223ENST00000474643 PGAP1Q75T13 922 aa12.75□□□□□ -0.37
VARS-223ENST00000474643 RNF133Q8WVZ7 376 aa12.75□□□□□ -0.37
VARS-223ENST00000474643 SPRYD4Q8WW59 207 aaPredicted RBP12.75□□□□□ -0.37
VARS-223ENST00000474643 C22orf15Q8WYQ4 148 aa12.75□□□□□ -0.37
VARS-223ENST00000474643 ZNF184Q99676 751 aaPredicted RBP12.75□□□□□ -0.37
VARS-223ENST00000474643 YIPF3Q9GZM5 350 aa12.75□□□□□ -0.37
VARS-223ENST00000474643 BRD7Q9NPI1 651 aa12.75□□□□□ -0.37
VARS-223ENST00000474643 GMPPBQ9Y5P6 360 aa12.75□□□□□ -0.37
VARS-223ENST00000474643 TMEM14AQ9Y6G1 99 aa12.75□□□□□ -0.37
VARS-223ENST00000474643 CCDC182A6NF36 153 aa12.74□□□□□ -0.37
VARS-223ENST00000474643 GGT3PA6NGU5 568 aa12.74□□□□□ -0.37
VARS-223ENST00000474643 IGHV2-70P01814 119 aa12.74□□□□□ -0.37
VARS-223ENST00000474643 RPS2P15880 293 aaKnown RBP12.74□□□□□ -0.37
VARS-223ENST00000474643 HCCSP53701 268 aa12.74□□□□□ -0.37
VARS-223ENST00000474643 AQP4P55087 323 aa12.74□□□□□ -0.37
VARS-223ENST00000474643 PRSS12P56730 875 aa12.74□□□□□ -0.37
VARS-223ENST00000474643 SNAI3Q3KNW1 292 aa12.74□□□□□ -0.37
VARS-223ENST00000474643 TMEM155Q4W5P6 130 aa12.74□□□□□ -0.37
VARS-223ENST00000474643 AADACL4Q5VUY2 407 aa12.74□□□□□ -0.37
VARS-223ENST00000474643 KCTD18Q6PI47 426 aaPredicted RBP12.74□□□□□ -0.37
VARS-223ENST00000474643 IZUMO2Q6UXV1 221 aa12.74□□□□□ -0.37
VARS-223ENST00000474643 COLCA1Q6ZS62 124 aa12.74□□□□□ -0.37
VARS-223ENST00000474643 C1orf87Q8N0U7 546 aa12.74□□□□□ -0.37
VARS-223ENST00000474643 SEMA6DQ8NFY4 1073 aa12.74□□□□□ -0.37
VARS-223ENST00000474643 OR8G5Q8NG78 346 aa12.74□□□□□ -0.37
VARS-223ENST00000474643 PGAM5Q96HS1 289 aa12.74□□□□□ -0.37
VARS-223ENST00000474643 AMELYQ99218 206 aa12.74□□□□□ -0.37
VARS-223ENST00000474643 DCAF16Q9NXF7 216 aa12.74□□□□□ -0.37
VARS-223ENST00000474643 IKZF2Q9UKS7 526 aa12.74□□□□□ -0.37
VARS-223ENST00000474643 SNTNA6NMZ2 147 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 XRCC2O43543 280 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 AVPP01185 164 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 OTX1P32242 354 aaPredicted RBP12.73□□□□□ -0.37
VARS-223ENST00000474643 GK2Q14410 553 aaPredicted RBP12.73□□□□□ -0.37
VARS-223ENST00000474643 OCLNQ16625 522 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 TIGD6Q17RP2 521 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 GFOD2Q3B7J2 385 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 SPRNQ5BIV9 151 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 ZNF691Q5VV52 312 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 BTNL3Q6UXE8 466 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 LRRN1Q6UXK5 716 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 C1orf229Q6ZS94 237 aaPredicted RBP12.73□□□□□ -0.37
VARS-223ENST00000474643 FAM57BQ71RH2 274 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 SLC35F2Q8IXU6 374 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 OR51G2Q8NGK0 314 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 OR2AE1Q8NHA4 323 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 RHOXF1Q8NHV9 184 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 RFKQ969G6 155 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 Q96MT0 163 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 MROQ9BYG7 248 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 ANKRD60Q9BZ19 345 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 TTTY10Q9BZA0 68 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 Q9H521 79 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 PATZ1Q9HBE1 687 aaKnown RBP12.73□□□□□ -0.37
VARS-223ENST00000474643 WARS2Q9UGM6 360 aaKnown RBP12.73□□□□□ -0.37
VARS-223ENST00000474643 AUP1Q9Y679 476 aa12.73□□□□□ -0.37
VARS-223ENST00000474643 IGHV3-64DA0A0J9YX35 117 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 IQCF6A8MYZ5 107 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 ZNF670-ZNF695F2Z2N8 137 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 PSMD9O00233 223 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 ALOX5APP20292 161 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 OPRL1P41146 370 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 MMP16P51512 607 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 ZNF121P58317 390 aaPredicted RBP12.72□□□□□ -0.37
VARS-223ENST00000474643 GNB2P62879 340 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 ZMYND11Q15326 602 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 GLYATL3Q5SZD4 288 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 Q6ZR03 302 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 RHOUQ7L0Q8 258 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 NLRC3Q7RTR2 1065 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 LRRC28Q86X40 367 aaPredicted RBP12.72□□□□□ -0.37
VARS-223ENST00000474643 OR11L1Q8NGX0 322 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 FAM216AQ8WUB2 273 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 FBLIM1Q8WUP2 373 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 CYGBQ8WWM9 190 aa12.72□□□□□ -0.37
VARS-223ENST00000474643 ASB17Q8WXJ9 295 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms