RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 BANF2Q9H503 90 aa18.69■□□□□ 0.58
COL18A1-207ENST00000473212 SEC61A2Q9H9S3 476 aa18.69■□□□□ 0.58
COL18A1-207ENST00000473212 B3GAT1Q9P2W7 334 aa18.69■□□□□ 0.58
COL18A1-207ENST00000473212 SDK2Q58EX2 2172 aa18.68■□□□□ 0.58
COL18A1-207ENST00000473212 ZNF814B7Z6K7 855 aa18.68■□□□□ 0.58
COL18A1-207ENST00000473212 GSK3AP49840 483 aa18.68■□□□□ 0.58
COL18A1-207ENST00000473212 COMMD2Q86X83 199 aa18.68■□□□□ 0.58
COL18A1-207ENST00000473212 OR4A4PQ8NGN8 299 aa18.68■□□□□ 0.58
COL18A1-207ENST00000473212 ZNF501Q96CX3 271 aaPredicted RBP18.68■□□□□ 0.58
COL18A1-207ENST00000473212 CHRNA10Q9GZZ6 450 aa18.68■□□□□ 0.58
COL18A1-207ENST00000473212 NCOA6Q14686 2063 aaPredicted RBP18.68■□□□□ 0.58
COL18A1-207ENST00000473212 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.68■□□□□ 0.58
COL18A1-207ENST00000473212 A0A1W2PNR3 127 aa18.68■□□□□ 0.58
COL18A1-207ENST00000473212 C5orf63A6NC05 138 aa18.68■□□□□ 0.58
COL18A1-207ENST00000473212 RAMP1O60894 148 aa18.68■□□□□ 0.58
COL18A1-207ENST00000473212 HNRNPKP61978 463 aaKnown RBP eCLIP18.68■□□□□ 0.587e-12■■■■□ 20
COL18A1-207ENST00000473212 CYCSP99999 105 aaKnown RBP18.68■□□□□ 0.58
COL18A1-207ENST00000473212 GFOD2Q3B7J2 385 aa18.68■□□□□ 0.58
COL18A1-207ENST00000473212 H3F3CQ6NXT2 135 aa18.68■□□□□ 0.58
COL18A1-207ENST00000473212 ZNF529Q6P280 563 aa18.68■□□□□ 0.58
COL18A1-207ENST00000473212 TREM1Q9NP99 234 aa18.68■□□□□ 0.58
COL18A1-207ENST00000473212 SERINC1Q9NRX5 453 aa18.68■□□□□ 0.58
COL18A1-207ENST00000473212 GPR132Q9UNW8 380 aa18.68■□□□□ 0.58
COL18A1-207ENST00000473212 MRPS28Q9Y2Q9 187 aaKnown RBP18.68■□□□□ 0.58
COL18A1-207ENST00000473212 PIAS2O75928 621 aa18.67■□□□□ 0.58
COL18A1-207ENST00000473212 PVALBP20472 110 aaPredicted RBP18.67■□□□□ 0.58
COL18A1-207ENST00000473212 OR3A4PP47883 348 aa18.67■□□□□ 0.58
COL18A1-207ENST00000473212 CLEC18BQ6UXF7 455 aa18.67■□□□□ 0.58
COL18A1-207ENST00000473212 RAB3CQ96E17 227 aa18.67■□□□□ 0.58
COL18A1-207ENST00000473212 CNTNAP3BQ96NU0 1288 aa18.67■□□□□ 0.58
COL18A1-207ENST00000473212 OR5AC2Q9NZP5 309 aa18.67■□□□□ 0.58
COL18A1-207ENST00000473212 LHX6Q9UPM6 363 aa18.67■□□□□ 0.58
COL18A1-207ENST00000473212 KLF2Q9Y5W3 355 aaPredicted RBP18.67■□□□□ 0.58
COL18A1-207ENST00000473212 EML6Q6ZMW3 1958 aa18.67■□□□□ 0.58
COL18A1-207ENST00000473212 ANKUB1A6NFN9 424 aa18.67■□□□□ 0.58
COL18A1-207ENST00000473212 RAD51DO75771 328 aa18.67■□□□□ 0.58
COL18A1-207ENST00000473212 NAAAQ02083 359 aa18.67■□□□□ 0.58
COL18A1-207ENST00000473212 RSPO4Q2I0M5 234 aaPredicted RBP18.67■□□□□ 0.58
COL18A1-207ENST00000473212 SHEQ5VZ18 495 aa18.67■□□□□ 0.58
COL18A1-207ENST00000473212 SLC25A45Q8N413 288 aa18.67■□□□□ 0.58
COL18A1-207ENST00000473212 RAB33BQ9H082 229 aa18.67■□□□□ 0.58
COL18A1-207ENST00000473212 LHFPL6Q9Y693 200 aa18.67■□□□□ 0.58
COL18A1-207ENST00000473212 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.66■□□□□ 0.58
COL18A1-207ENST00000473212 CHRM2P08172 466 aa18.66■□□□□ 0.58
COL18A1-207ENST00000473212 FAM157CP0CG43 387 aa18.66■□□□□ 0.58
COL18A1-207ENST00000473212 RPL35P42766 123 aaKnown RBP18.66■□□□□ 0.58
COL18A1-207ENST00000473212 AKR1D1P51857 326 aa18.66■□□□□ 0.58
COL18A1-207ENST00000473212 NXPH1P58417 271 aa18.66■□□□□ 0.58
COL18A1-207ENST00000473212 PNLIPRP3Q17RR3 467 aa18.66■□□□□ 0.58
COL18A1-207ENST00000473212 ZNF585AQ6P3V2 769 aa18.66■□□□□ 0.58
COL18A1-207ENST00000473212 TMEM200AQ86VY9 491 aa18.66■□□□□ 0.58
COL18A1-207ENST00000473212 NUDT16L1Q9BRJ7 211 aaKnown RBP18.66■□□□□ 0.58
COL18A1-207ENST00000473212 OR2S2Q9NQN1 319 aa18.66■□□□□ 0.58
COL18A1-207ENST00000473212 FBLN5Q9UBX5 448 aa18.66■□□□□ 0.58
COL18A1-207ENST00000473212 LIPT2A6NK58 231 aa18.66■□□□□ 0.58
COL18A1-207ENST00000473212 ZNF705EA8MWA4 302 aaPredicted RBP18.66■□□□□ 0.58
COL18A1-207ENST00000473212 SFT2D2O95562 160 aa18.66■□□□□ 0.58
COL18A1-207ENST00000473212 FOSL2P15408 326 aa18.66■□□□□ 0.58
COL18A1-207ENST00000473212 HIST1H1DP16402 221 aaKnown RBP18.66■□□□□ 0.58
COL18A1-207ENST00000473212 C10orf91Q5T1B1 145 aa18.66■□□□□ 0.58
COL18A1-207ENST00000473212 ABHD12BQ7Z5M8 362 aaPredicted RBP18.66■□□□□ 0.58
COL18A1-207ENST00000473212 OR6S1Q8NH40 331 aa18.66■□□□□ 0.58
COL18A1-207ENST00000473212 ST8SIA1Q92185 356 aa18.66■□□□□ 0.58
COL18A1-207ENST00000473212 ZNF768Q9H5H4 540 aaKnown RBP18.66■□□□□ 0.58
COL18A1-207ENST00000473212 POLR1DQ9Y2S0 133 aa18.66■□□□□ 0.58
COL18A1-207ENST00000473212 FLVCR1Q9Y5Y0 555 aa18.66■□□□□ 0.58
COL18A1-207ENST00000473212 CDC14BO60729 498 aa18.65■□□□□ 0.58
COL18A1-207ENST00000473212 LAP3P28838 519 aa18.65■□□□□ 0.58
COL18A1-207ENST00000473212 NPBWR1P48145 328 aa18.65■□□□□ 0.58
COL18A1-207ENST00000473212 TMEM50BP56557 158 aa18.65■□□□□ 0.58
COL18A1-207ENST00000473212 MYBPHQ13203 477 aa18.65■□□□□ 0.58
COL18A1-207ENST00000473212 SPAG16Q8N0X2 631 aa18.65■□□□□ 0.58
COL18A1-207ENST00000473212 OR5AS1Q8N127 324 aa18.65■□□□□ 0.58
COL18A1-207ENST00000473212 C1orf147Q96MC9 270 aaPredicted RBP18.65■□□□□ 0.58
COL18A1-207ENST00000473212 MMP26Q9NRE1 261 aa18.65■□□□□ 0.58
COL18A1-207ENST00000473212 CARHSP1Q9Y2V2 147 aaKnown RBP18.65■□□□□ 0.58
COL18A1-207ENST00000473212 E9PLN8 166 aa18.65■□□□□ 0.58
COL18A1-207ENST00000473212 APOBEC1P41238 236 aaKnown RBP18.65■□□□□ 0.58
COL18A1-207ENST00000473212 MST1LQ2TV78 715 aa18.65■□□□□ 0.58
COL18A1-207ENST00000473212 ANKRD55Q3KP44 614 aa18.65■□□□□ 0.58
COL18A1-207ENST00000473212 VAX1Q5SQQ9 334 aa18.65■□□□□ 0.58
COL18A1-207ENST00000473212 PLXDC1Q8IUK5 500 aa18.65■□□□□ 0.58
COL18A1-207ENST00000473212 DDIT4LQ96D03 193 aa18.65■□□□□ 0.58
COL18A1-207ENST00000473212 CDC6Q99741 560 aa18.65■□□□□ 0.58
COL18A1-207ENST00000473212 KLRF1Q9NZS2 232 aa18.65■□□□□ 0.58
COL18A1-207ENST00000473212 NPIPB13A6NJU9 1138 aa18.64■□□□□ 0.57
COL18A1-207ENST00000473212 NPIPB4C9JG80 1138 aa18.64■□□□□ 0.57
COL18A1-207ENST00000473212 RER1O15258 196 aa18.64■□□□□ 0.57
COL18A1-207ENST00000473212 DUX1O43812 170 aa18.64■□□□□ 0.57
COL18A1-207ENST00000473212 GSTP1P09211 210 aaKnown RBP18.64■□□□□ 0.57
COL18A1-207ENST00000473212 GPR85P60893 370 aa18.64■□□□□ 0.57
COL18A1-207ENST00000473212 SUPT4H1P63272 117 aaKnown RBP18.64■□□□□ 0.57
COL18A1-207ENST00000473212 DHRS7BQ6IAN0 325 aaPredicted RBP18.64■□□□□ 0.57
COL18A1-207ENST00000473212 RAB11FIP2Q7L804 512 aa18.64■□□□□ 0.57
COL18A1-207ENST00000473212 NAA40Q86UY6 237 aa18.64■□□□□ 0.57
COL18A1-207ENST00000473212 MISPQ8IVT2 679 aa18.64■□□□□ 0.57
COL18A1-207ENST00000473212 ARHGAP5-AS1Q96IT6 56 aa18.64■□□□□ 0.57
COL18A1-207ENST00000473212 FAM71F1Q96KD3 344 aaPredicted RBP18.64■□□□□ 0.57
COL18A1-207ENST00000473212 TMEM59Q9BXS4 323 aa18.64■□□□□ 0.57
COL18A1-207ENST00000473212 RAB18Q9NP72 206 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms