RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 TNFSF4P23510 183 aa16.8■□□□□ 0.28
UBQLN4-203ENST00000472638 RNLSQ5VYX0 342 aa16.8■□□□□ 0.28
UBQLN4-203ENST00000472638 FBXW12Q6X9E4 464 aa16.8■□□□□ 0.28
UBQLN4-203ENST00000472638 ACBD7Q8N6N7 88 aa16.8■□□□□ 0.28
UBQLN4-203ENST00000472638 OR10H4Q8NGA5 316 aa16.8■□□□□ 0.28
UBQLN4-203ENST00000472638 OTOSQ8NHW6 89 aa16.8■□□□□ 0.28
UBQLN4-203ENST00000472638 ITLN1Q8WWA0 313 aa16.8■□□□□ 0.28
UBQLN4-203ENST00000472638 HIF1ANQ9NWT6 349 aa16.8■□□□□ 0.28
UBQLN4-203ENST00000472638 EXOSC1Q9Y3B2 195 aaKnown RBP16.8■□□□□ 0.28
UBQLN4-203ENST00000472638 RNF212BA8MTL3 300 aa16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 ZNF670-ZNF695F2Z2N8 137 aa16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 J3QW42 95 aa16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 ZNF593O00488 134 aaPredicted RBP16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 LCATP04180 440 aa16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 SPARCP09486 303 aa16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 MYL12AP19105 171 aa16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 SRP14P37108 136 aaKnown RBP16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 ECH1Q13011 328 aa16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 KRTAP27-1Q3LI81 207 aa16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 ZNF773Q6PK81 442 aa16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 DPY19L4Q7Z388 723 aa16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 BHLHE23Q8NDY6 225 aa16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 OR10S1Q8NGN2 331 aa16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 SGCDQ92629 289 aa16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 TMEM186Q96B77 213 aa16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 GAL3ST1Q99999 423 aa16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 CDCA4Q9BXL8 241 aa16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 LAMP5Q9UJQ1 280 aa16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.79■□□□□ 0.28
UBQLN4-203ENST00000472638 MAGEA13PA6NCF6 341 aa16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 H0YL77 283 aa16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 PHF1O43189 567 aaPredicted RBP16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 IGHV2-5P01817 119 aa16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 MT-ND2P03891 347 aa16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 HTR1AP08908 422 aa16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 SRSF2Q01130 221 aaKnown RBP16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 SLC3A1Q07837 685 aa16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 COLCA1Q6ZS62 124 aa16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 DCXRQ7Z4W1 244 aa16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 OR8G5Q8NG78 346 aa16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 OR10AD1Q8NGE0 317 aa16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 OR51F2Q8NH61 342 aa16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 ASB17Q8WXJ9 295 aa16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 MRPL48Q96GC5 212 aaKnown RBP16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 MYCBPQ99417 103 aaPredicted RBP16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 C1QTNF5Q9BXJ0 243 aa16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 TMEM106BQ9NUM4 274 aa16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 ERVK-18Q9QC07 812 aa16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 COPS3Q9UNS2 423 aa16.78■□□□□ 0.28
UBQLN4-203ENST00000472638 ATRQ13535 2644 aa16.77■□□□□ 0.28
UBQLN4-203ENST00000472638 DNHD1Q96M86 4753 aa16.77■□□□□ 0.28
UBQLN4-203ENST00000472638 A0A087WXM4 84 aa16.77■□□□□ 0.28
UBQLN4-203ENST00000472638 IGHV3-64DA0A0J9YX35 117 aa16.77■□□□□ 0.28
UBQLN4-203ENST00000472638 A0A1W2PQL4 384 aaPredicted RBP16.77■□□□□ 0.28
UBQLN4-203ENST00000472638 DAPL1A0PJW8 107 aa16.77■□□□□ 0.28
UBQLN4-203ENST00000472638 TNFRSF1AP19438 455 aa16.77■□□□□ 0.28
UBQLN4-203ENST00000472638 ALOX5APP20292 161 aa16.77■□□□□ 0.28
UBQLN4-203ENST00000472638 C21orf33P30042 268 aaPredicted RBP16.77■□□□□ 0.28
UBQLN4-203ENST00000472638 TPTEP56180 551 aa16.77■□□□□ 0.28
UBQLN4-203ENST00000472638 IRF3Q14653 427 aa16.77■□□□□ 0.28
UBQLN4-203ENST00000472638 PEG10Q86TG7 708 aaKnown RBP16.77■□□□□ 0.28
UBQLN4-203ENST00000472638 TSPAN14Q8NG11 270 aa16.77■□□□□ 0.28
UBQLN4-203ENST00000472638 RAB39BQ96DA2 213 aa16.77■□□□□ 0.28
UBQLN4-203ENST00000472638 OR2V2Q96R30 315 aa16.77■□□□□ 0.28
UBQLN4-203ENST00000472638 CHCHD3Q9NX63 227 aaKnown RBP16.77■□□□□ 0.28
UBQLN4-203ENST00000472638 ERVK13-1Q9NX77 482 aa16.77■□□□□ 0.28
UBQLN4-203ENST00000472638 IL19Q9UHD0 177 aa16.77■□□□□ 0.28
UBQLN4-203ENST00000472638 SNX5Q9Y5X3 404 aa16.77■□□□□ 0.28
UBQLN4-203ENST00000472638 TRIM64CA6NLI5 447 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 M0R135 149 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 PLPP2O43688 288 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 LIMS3P0CW19 117 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 LIMS4P0CW20 117 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 PCMT1P22061 227 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 SLC6A9P48067 706 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 ACTA2P62736 377 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 ACTG2P63267 376 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 ZNF85Q03923 595 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 EGR3Q06889 387 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 EIF2B1Q14232 305 aaKnown RBP16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 GALEQ14376 348 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 GK2Q14410 553 aaPredicted RBP16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 TBCEQ15813 527 aaPredicted RBP16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 FAHD2BQ6P2I3 314 aaPredicted RBP16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 SPATC1Q76KD6 591 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 EGFL6Q8IUX8 553 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 SVOPQ8N4V2 548 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 ZNF283Q8N7M2 679 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 ST7LQ8TDW4 575 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 SPTSSAQ969W0 71 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 ZNF799Q96GE5 643 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 FAHD2AQ96GK7 314 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 TBX5Q99593 518 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 ZNF649Q9BS31 505 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 CCDC90BQ9GZT6 254 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 CENPMQ9NSP4 180 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 PPP1R3CQ9UQK1 317 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 KLHDC2Q9Y2U9 406 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 N6AMT1Q9Y5N5 214 aa16.76■□□□□ 0.27
UBQLN4-203ENST00000472638 NPTNQ9Y639 398 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms