RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 PRSS12P56730 875 aa12.03□□□□□ -0.48
BRCA1-211ENST00000472490 ADARB1P78563 741 aaKnown RBP12.03□□□□□ -0.48
BRCA1-211ENST00000472490 OR8B8Q15620 311 aa12.03□□□□□ -0.48
BRCA1-211ENST00000472490 TMEM249Q2WGJ8 235 aa12.03□□□□□ -0.48
BRCA1-211ENST00000472490 BCL2L15Q5TBC7 163 aa12.03□□□□□ -0.48
BRCA1-211ENST00000472490 ZNF771Q7L3S4 317 aaPredicted RBP12.03□□□□□ -0.48
BRCA1-211ENST00000472490 C8orf59Q8N0T1 100 aaPredicted RBP12.03□□□□□ -0.48
BRCA1-211ENST00000472490 OR8S1Q8NH09 359 aa12.03□□□□□ -0.48
BRCA1-211ENST00000472490 TMEM106BQ9NUM4 274 aa12.03□□□□□ -0.48
BRCA1-211ENST00000472490 ZNF319Q9P2F9 582 aa12.03□□□□□ -0.48
BRCA1-211ENST00000472490 ARID1AO14497 2285 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 IGHV4-61A0A0C4DH41 118 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 ANXA2P2A6NMY6 339 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 PRR32B1ATL7 298 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 F5H5P2 479 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 H0YJX3 145 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 H0YL77 283 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 J3QRE1 110 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 LY6G6DO95868 133 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 HLA-DPB1P04440 258 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 CD200P41217 278 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 GZMKP49863 264 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 ZNF181Q2M3W8 571 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 ZNF684Q5T5D7 378 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 LIPNQ5VXI9 398 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 DMRTA1Q5VZB9 504 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 CYB5R2Q6BCY4 276 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 SSX6Q7RTT6 188 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 C1orf87Q8N0U7 546 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 LGALS12Q96DT0 336 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 SIGLEC11Q96RL6 698 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 SMR3AQ99954 134 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 PAPOLGQ9BWT3 736 aaKnown RBP12.02□□□□□ -0.49
BRCA1-211ENST00000472490 GCM1Q9NP62 436 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 MRPS18AQ9NVS2 196 aaKnown RBP12.02□□□□□ -0.49
BRCA1-211ENST00000472490 TREM2Q9NZC2 230 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 NKX1-2Q9UD57 310 aaPredicted RBP12.02□□□□□ -0.49
BRCA1-211ENST00000472490 AASSQ9UDR5 926 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 GNG8Q9UK08 70 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 OR52A1Q9UKL2 312 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 MPC1Q9Y5U8 109 aa12.02□□□□□ -0.49
BRCA1-211ENST00000472490 MAGEB4O15481 346 aaPredicted RBP12.01□□□□□ -0.49
BRCA1-211ENST00000472490 SRSF10O75494 262 aaKnown RBP12.01□□□□□ -0.49
BRCA1-211ENST00000472490 RPP14O95059 124 aaKnown RBP12.01□□□□□ -0.49
BRCA1-211ENST00000472490 CLIC3O95833 236 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 ANOS1P23352 680 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 GATA4P43694 442 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 ZNF85Q03923 595 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 MRPL28Q13084 256 aaKnown RBP12.01□□□□□ -0.49
BRCA1-211ENST00000472490 MED21Q13503 144 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 RIPK1Q13546 671 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 GALEQ14376 348 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 ZBTB37Q5TC79 503 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 THAP5Q7Z6K1 395 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 ELMOD2Q8IZ81 293 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 SEMA6DQ8NFY4 1073 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 OR11L1Q8NGX0 322 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 OR51E1Q8TCB6 317 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 HAVCR2Q8TDQ0 301 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 APH1BQ8WW43 257 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 HIST1H2AAQ96QV6 131 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 GSX1Q9H4S2 264 aaPredicted RBP12.01□□□□□ -0.49
BRCA1-211ENST00000472490 FN3KRPQ9HA64 309 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 AMBNQ9NP70 447 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 WIPI2Q9Y4P8 454 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 CACNG2Q9Y698 323 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 ARFGEF3Q5TH69 2177 aa12.01□□□□□ -0.49
BRCA1-211ENST00000472490 AKAP9Q99996 3911 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 ZNF816-ZNF321PA0A0X1KG74 233 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 LRP5LA4QPB2 252 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 CD5LO43866 347 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 FAM20BO75063 409 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 DHRS3O75911 302 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 PNPP00491 289 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 CST4P01036 141 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 IGHA1P01876 353 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 TTRP02766 147 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 RPSAP08865 295 aaKnown RBP12□□□□□ -0.49
BRCA1-211ENST00000472490 ISL1P61371 349 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 MVKQ03426 396 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 MFGE8Q08431 387 aaPredicted RBP12□□□□□ -0.49
BRCA1-211ENST00000472490 RIPPLY1Q0D2K3 151 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 MAB21L1Q13394 359 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 CDONQ4KMG0 1287 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 CCDC54Q8NEL0 328 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 RAB39BQ96DA2 213 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 LYZL4Q96KX0 146 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 MICU1Q9BPX6 476 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 G6PC2Q9NQR9 355 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 GPR84Q9NQS5 396 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 ACOXLQ9NUZ1 547 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 NPTNQ9Y639 398 aa12□□□□□ -0.49
BRCA1-211ENST00000472490 ISPDA4D126 451 aa11.99□□□□□ -0.49
BRCA1-211ENST00000472490 DHRS7CA6NNS2 312 aa11.99□□□□□ -0.49
BRCA1-211ENST00000472490 TMEM178BH3BS89 294 aa11.99□□□□□ -0.49
BRCA1-211ENST00000472490 WBP4O75554 376 aaKnown RBP11.99□□□□□ -0.49
BRCA1-211ENST00000472490 PTBP3O95758 552 aaKnown RBP11.99□□□□□ -0.49
BRCA1-211ENST00000472490 IGLV3-1P01715 115 aa11.99□□□□□ -0.49
BRCA1-211ENST00000472490 UBCP0CG48 685 aaKnown RBP11.99□□□□□ -0.49
BRCA1-211ENST00000472490 ZNF12P17014 697 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms