RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 PCK1P35558 622 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 NDUFA8P51970 172 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 AP1S2P56377 157 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 OR2B8PP59922 312 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 RAB11AP62491 216 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 PITPNAQ00169 270 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 ZNF33AQ06730 810 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 SLC39A6Q13433 755 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 PIGHQ14442 188 aaPredicted RBP2.08□□□□□ -2.08
PTCD3-209ENST00000472044 RAB11BQ15907 218 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 KLHL40Q2TBA0 621 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 YIF1BQ5BJH7 314 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 PIP5KL1Q5T9C9 394 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 FAM222AQ5U5X8 452 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 CD300LGQ6UXG3 332 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 MYOCDQ8IZQ8 938 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 CMTM8Q8IZV2 173 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 OR1J4Q8NGS1 313 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 OR13G1Q8NGZ3 307 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 NAT6Q93015 286 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 DYNLL2Q96FJ2 89 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 SULT4A1Q9BR01 284 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 CHCHD7Q9BUK0 85 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 ZNF717Q9BY31 904 aaPredicted RBP2.08□□□□□ -2.08
PTCD3-209ENST00000472044 ING2Q9H160 280 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 C8orf33Q9H7E9 229 aaPredicted RBP2.08□□□□□ -2.08
PTCD3-209ENST00000472044 ZC4H2Q9NQZ6 224 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 TREX1Q9NSU2 369 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 DDX18Q9NVP1 670 aaKnown RBP2.08□□□□□ -2.08
PTCD3-209ENST00000472044 RABL2AQ9UBK7 228 aaPredicted RBP2.08□□□□□ -2.08
PTCD3-209ENST00000472044 ZNF257Q9Y2Q1 563 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 UBIAD1Q9Y5Z9 338 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 COMMD3-BMI1R4GMX3 469 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 TRIP11Q15643 1979 aa2.08□□□□□ -2.08
PTCD3-209ENST00000472044 NDUFC2-KCTD14E9PQ53 114 aa2.07□□□□□ -2.08
PTCD3-209ENST00000472044 PLIN3O60664 434 aa2.07□□□□□ -2.08
PTCD3-209ENST00000472044 RAB7AP51149 207 aa2.07□□□□□ -2.08
PTCD3-209ENST00000472044 CYP24A1Q07973 514 aa2.07□□□□□ -2.08
PTCD3-209ENST00000472044 C5orf64Q2M2E5 130 aa2.07□□□□□ -2.08
PTCD3-209ENST00000472044 DNLZQ5SXM8 178 aa2.07□□□□□ -2.08
PTCD3-209ENST00000472044 GUSBP11Q6P575 273 aa2.07□□□□□ -2.08
PTCD3-209ENST00000472044 SLC25A34Q6PIV7 304 aa2.07□□□□□ -2.08
PTCD3-209ENST00000472044 ZNF547Q8IVP9 402 aa2.07□□□□□ -2.08
PTCD3-209ENST00000472044 RXFP4Q8TDU9 374 aa2.07□□□□□ -2.08
PTCD3-209ENST00000472044 ISG20Q96AZ6 181 aaKnown RBP2.07□□□□□ -2.08
PTCD3-209ENST00000472044 RCN3Q96D15 328 aa2.07□□□□□ -2.08
PTCD3-209ENST00000472044 C18orf15Q96N68 181 aa2.07□□□□□ -2.08
PTCD3-209ENST00000472044 ULBP2Q9BZM5 246 aa2.07□□□□□ -2.08
PTCD3-209ENST00000472044 PRSS16Q9NQE7 514 aa2.07□□□□□ -2.08
PTCD3-209ENST00000472044 HES2Q9Y543 173 aa2.07□□□□□ -2.08
PTCD3-209ENST00000472044 YEATS2Q9ULM3 1422 aa2.07□□□□□ -2.08
PTCD3-209ENST00000472044 BAZ2AQ9UIF9 1905 aaKnown RBP2.07□□□□□ -2.08
PTCD3-209ENST00000472044 KIAA1671Q9BY89 1806 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 SLC22A20A6NK97 555 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 SIVA1O15304 175 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 CTNSO60931 367 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 SERPINB7O75635 380 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 FARS2O95363 451 aaKnown RBP2.06□□□□□ -2.08
PTCD3-209ENST00000472044 IGLV3-19P01714 112 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 MT-ND4P03905 459 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 CD5P06127 495 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 ZNF14P17017 642 aaPredicted RBP2.06□□□□□ -2.08
PTCD3-209ENST00000472044 TCP1P17987 556 aaKnown RBP2.06□□□□□ -2.08
PTCD3-209ENST00000472044 PRLHRP49683 370 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 DAOAP59103 153 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 IFITM3Q01628 133 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 GABRA6Q16445 453 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 SLC25A35Q3KQZ1 300 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 TMPRSS11AQ6ZMR5 421 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 LINC00336Q6ZUF6 198 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 KRTAP5-5Q701N2 237 aaPredicted RBP2.06□□□□□ -2.08
PTCD3-209ENST00000472044 MDP1Q86V88 176 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 SLC35G3Q8N808 338 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 ST20-AS1Q8NBB2 130 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 OR1L1Q8NH94 360 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 CA5BP1Q8WTZ4 195 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 APH1AQ96BI3 265 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 RMI2Q96E14 147 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 KCNS1Q96KK3 526 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 OR4K3Q96R72 315 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 EMC6Q9BV81 110 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 CRLF2Q9HC73 371 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 FBXO6Q9NRD1 293 aaPredicted RBP2.06□□□□□ -2.08
PTCD3-209ENST00000472044 C21orf62Q9NYP8 219 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 MROH7Q68CQ1 1323 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 SVILO95425 2214 aa2.06□□□□□ -2.08
PTCD3-209ENST00000472044 LOXHD1Q8IVV2 1947 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 IGHV3-49A0A0A0MS15 119 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 A0A0A6YYD5 115 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 A0A0B4J2E0 115 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 H3BN98 237 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 MPDU1O75352 247 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 HSBP1O75506 76 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 CDRT1O95170 752 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 SCELO95171 688 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 CYB5R3P00387 301 aaPredicted RBP2.05□□□□□ -2.08
PTCD3-209ENST00000472044 TRBV12-3P01733 135 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 CATP04040 527 aaKnown RBP2.05□□□□□ -2.08
PTCD3-209ENST00000472044 PSMB5P28074 263 aa2.05□□□□□ -2.08
PTCD3-209ENST00000472044 GGT2P36268 569 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms