RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ZNF684Q5T5D7 378 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 OR2G6Q5TZ20 316 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 UBE2UQ5VVX9 321 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 XAF1Q6GPH4 301 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 TMEM53Q6P2H8 277 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 FAHD2BQ6P2I3 314 aaPredicted RBP7.71□□□□□ -1.18
SF3A1-206ENST00000471037 CFAP77Q6ZQR2 320 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 SSX6Q7RTT6 188 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 C1QL2Q7Z5L3 287 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 KRT77Q7Z794 578 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 PEG10Q86TG7 708 aaKnown RBP7.71□□□□□ -1.18
SF3A1-206ENST00000471037 ZNF584Q8IVC4 421 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 ZNF679Q8IYX0 411 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 ZNF485Q8NCK3 441 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 SPRYD4Q8WW59 207 aaPredicted RBP7.71□□□□□ -1.18
SF3A1-206ENST00000471037 MUL1Q969V5 352 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 SLAMF6Q96DU3 332 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 FAHD2AQ96GK7 314 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 MAP6Q96JE9 813 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 C4orf36Q96KX1 117 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 MROQ9BYG7 248 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 HDHD2Q9H0R4 259 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 NIPAL2Q9H841 368 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 ISYNA1Q9NPH2 558 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 DDX28Q9NUL7 540 aaKnown RBP7.71□□□□□ -1.18
SF3A1-206ENST00000471037 ATPIF1Q9UII2 106 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 IKZF2Q9UKS7 526 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 LSM2Q9Y333 95 aaKnown RBP7.71□□□□□ -1.18
SF3A1-206ENST00000471037 TIMM10BQ9Y5J6 103 aa7.71□□□□□ -1.18
SF3A1-206ENST00000471037 A0A0G2JMP0 313 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 A0A0X1KG70 313 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 A0A1W2PPW3 197 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 C17orf100A8MU93 164 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 PRR32B1ATL7 298 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 J3QLI3 93 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 J3QLW9 94 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 RER1O15258 196 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 SGCEO43556 437 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 DOK2O60496 412 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 RGS9O75916 674 aaPredicted RBP7.7□□□□□ -1.18
SF3A1-206ENST00000471037 ABHD16AO95870 558 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 AVPP01185 164 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 SERPINA5P05154 406 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 TFAP2AP05549 437 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 LCKP06239 509 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 H2BFMP0C1H6 154 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 COX5BP10606 129 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 NAT2P11245 290 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 ZNF19P17023 458 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 DCTDP32321 178 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 OPRL1P41146 370 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 MAGEB1P43366 347 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 RPL5P46777 297 aaKnown RBP7.7□□□□□ -1.18
SF3A1-206ENST00000471037 GBX2P52951 348 aaPredicted RBP7.7□□□□□ -1.18
SF3A1-206ENST00000471037 OR12D2P58182 307 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 GRB2P62993 217 aaKnown RBP7.7□□□□□ -1.18
SF3A1-206ENST00000471037 ACSM1Q08AH1 577 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 ECH1Q13011 328 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 BLMHQ13867 455 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 RAB39AQ14964 217 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 MED22Q15528 200 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 NEDD8Q15843 81 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 PCGF3Q3KNV8 242 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 TP53I3Q53FA7 332 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 CCDC92Q53HC0 331 aaPredicted RBP7.7□□□□□ -1.18
SF3A1-206ENST00000471037 SYT6Q5T7P8 510 aaPredicted RBP7.7□□□□□ -1.18
SF3A1-206ENST00000471037 RGS7BPQ6MZT1 257 aaPredicted RBP7.7□□□□□ -1.18
SF3A1-206ENST00000471037 LRRN1Q6UXK5 716 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 VASH1Q7L8A9 365 aaPredicted RBP7.7□□□□□ -1.18
SF3A1-206ENST00000471037 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.7□□□□□ -1.18
SF3A1-206ENST00000471037 ALDH16A1Q8IZ83 802 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 YIPF7Q8N8F6 280 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 OR4M2Q8NGB6 313 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 OR10S1Q8NGN2 331 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 RAB39BQ96DA2 213 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 PELI1Q96FA3 418 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 COG8Q96MW5 612 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 OR5M11Q96RB7 305 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 AMELYQ99218 206 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 MGLLQ99685 303 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 COQ7Q99807 217 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 ATF6BQ99941 703 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 SUCNR1Q9BXA5 334 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 TMPRSS13Q9BYE2 586 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 TTTY10Q9BZA0 68 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 OR2H1Q9GZK4 316 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 ZNF665Q9H7R5 613 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 RNF121Q9H920 327 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 ELOVL3Q9HB03 270 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 PNRC2Q9NPJ4 139 aaKnown RBP7.7□□□□□ -1.18
SF3A1-206ENST00000471037 TRIM36Q9NQ86 728 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 CENPMQ9NSP4 180 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 BABAM2Q9NXR7 383 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 SLCO1C1Q9NYB5 712 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 NKIRAS2Q9NYR9 191 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 PLEK2Q9NYT0 353 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 MRM2Q9UI43 246 aaKnown RBP7.7□□□□□ -1.18
SF3A1-206ENST00000471037 DUSP13Q9UII6 198 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 GNG8Q9UK08 70 aa7.7□□□□□ -1.18
SF3A1-206ENST00000471037 FZR1Q9UM11 496 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms