RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 RAB38P57729 211 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 TAS2R50P59544 299 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 ST3GAL3Q11203 375 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 GABRA6Q16445 453 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 ODF4Q2M2E3 257 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 TTLL9Q3SXZ7 439 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 POM121L1PQ3SYA9 428 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 C1QL3Q5VWW1 255 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF621Q6ZSS3 439 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 CXorf67Q86X51 503 aaPredicted RBP4.53□□□□□ -1.68
COL3A1-205ENST00000470167 PHYKPLQ8IUZ5 450 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 C9orf40Q8IXQ3 194 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 ZDHHC23Q8IYP9 409 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 CFAP52Q8N1V2 620 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF614Q8N883 585 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 SDR9C7Q8NEX9 313 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 OR1L4Q8NGR5 311 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 OR1N2Q8NGR9 330 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 VN1R17PQ8TDU5 208 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 FCAMRQ8WWV6 532 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 GGHQ92820 318 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 SLC25A28Q96A46 364 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 PTX4Q96A99 478 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 MMABQ96EY8 250 aaPredicted RBP4.53□□□□□ -1.68
COL3A1-205ENST00000470167 SLC35A4Q96G79 324 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 LYSMD1Q96S90 227 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 SPATA25Q9BR10 227 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 ADAT1Q9BUB4 502 aaKnown RBP4.53□□□□□ -1.68
COL3A1-205ENST00000470167 ABHD6Q9BV23 337 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 HCAR1Q9BXC0 346 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 GPR174Q9BXC1 333 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 OR51J1Q9H342 316 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 RBKSQ9H477 322 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 PLK3Q9H4B4 646 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 GREM2Q9H772 168 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 ASF1BQ9NVP2 202 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 MARCH5Q9NX47 278 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 VAX2Q9UIW0 290 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 FBXW11Q9UKB1 542 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 PACSIN3Q9UKS6 424 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 TRAPPC2LQ9UL33 140 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 MMP17Q9ULZ9 603 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 RCE1Q9Y256 329 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 SHPRHQ149N8 1683 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 CDK5RAP2Q96SN8 1893 aa4.53□□□□□ -1.68
COL3A1-205ENST00000470167 USP54Q70EL1 1684 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 PRAMEF33A0A0G2JMD5 474 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 KBTBD11-OT1A0A1B0GTJ5 212 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.52□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF785A8K8V0 405 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 H0YIG0 161 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 SULT2B1O00204 365 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 SLC1A7O00341 560 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 SDHDO14521 159 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 ERI3O43414 337 aaKnown RBP4.52□□□□□ -1.69
COL3A1-205ENST00000470167 EIF4E2O60573 245 aaKnown RBP4.52□□□□□ -1.69
COL3A1-205ENST00000470167 TPST2O60704 377 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 GALR3O60755 368 aaPredicted RBP4.52□□□□□ -1.69
COL3A1-205ENST00000470167 PRAMEF10O60809 474 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 HLA-AP01891 365 aaKnown RBP4.52□□□□□ -1.69
COL3A1-205ENST00000470167 CA3P07451 260 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 CYBAP13498 195 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 FABP4P15090 132 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 PGAM2P15259 253 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 HIST1H1TP22492 207 aaPredicted RBP4.52□□□□□ -1.69
COL3A1-205ENST00000470167 NFYAP23511 347 aaPredicted RBP4.52□□□□□ -1.69
COL3A1-205ENST00000470167 NFYBP25208 207 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 NMBRP28336 390 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 GABRA5P31644 462 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 MDH2P40926 338 aaKnown RBP4.52□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF84P51523 738 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 MANFP55145 182 aaKnown RBP4.52□□□□□ -1.69
COL3A1-205ENST00000470167 BACE1P56817 501 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 TCTAP57738 103 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 TAS2R30P59541 319 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 UFM1P61960 85 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 NTHL1P78549 312 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 ST3GAL4Q11206 333 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 PRDX4Q13162 271 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 MEF2DQ14814 521 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF284Q2VY69 593 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF750Q32MQ0 723 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 SLC25A52Q3SY17 297 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 TIMM50Q3ZCQ8 353 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 AWAT1Q58HT5 328 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 CT83Q5H943 113 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 RABL3Q5HYI8 236 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 NIPAL3Q6P499 406 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 C19orf48Q6RUI8 117 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 ZNF705AQ6ZN79 300 aaPredicted RBP4.52□□□□□ -1.69
COL3A1-205ENST00000470167 DOK3Q7L591 496 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 NEGR1Q7Z3B1 354 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 ADGRE4PQ86SQ3 457 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 FAM219AQ8IW50 185 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 FAM126BQ8IXS8 530 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 TMEM183AQ8IXX5 376 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 IZUMO1Q8IYV9 350 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 FER1L6-AS1Q8NA97 138 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 PLPP5Q8NEB5 264 aa4.52□□□□□ -1.69
COL3A1-205ENST00000470167 OR5AN1Q8NGI8 311 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms