RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 ALG12Q9BV10 488 aa12.36□□□□□ -0.43
GPC1-208ENST00000469694 ZNF107Q9UII5 783 aaPredicted RBP12.36□□□□□ -0.43
GPC1-208ENST00000469694 A0A1B0GV90 55 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 SLC17A2O00624 439 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 CER1O95813 267 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 CSN2P05814 226 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 GUSBP08236 651 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 FBXO45P0C2W1 286 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 LPAR6P43657 344 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 RNF4P78317 190 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 NCMAPQ5T1S8 102 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 DPY19L2P2Q6ZN68 376 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 C10orf53Q8N6V4 93 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 ZNF676Q8N7Q3 588 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 PLPP5Q8NEB5 264 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 ZNF563Q8TA94 476 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 PCNX3Q9H6A9 2034 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 hCG_1809904A0A1W2PP81 198 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 A0A1W2PPH5 198 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 A0A1W2PR64 198 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 A0A1W2PRV1 198 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 C7orf77A4D0Y5 90 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 C5orf51A6NDU8 294 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 ELOA3DA6NLF2 546 aaPredicted RBP12.35□□□□□ -0.43
GPC1-208ENST00000469694 H0YIZ8 118 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 ADH6P28332 368 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 RAB5CP51148 216 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 ELOA3BQ3SY89 546 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 ZNF385CQ66K41 422 aaPredicted RBP12.35□□□□□ -0.43
GPC1-208ENST00000469694 FAM166AQ6J272 317 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 ZNF585AQ6P3V2 769 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 SLC23A3Q6PIS1 610 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 ZNF627Q7L945 461 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 SLC16A9Q7RTY1 509 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 ANGPTL5Q86XS5 388 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 ELOA3Q8NG57 546 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 OR2G2Q8NGZ5 317 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 ZNF775Q96BV0 537 aaPredicted RBP12.35□□□□□ -0.43
GPC1-208ENST00000469694 MALSU1Q96EH3 234 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 DCAF16Q9NXF7 216 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 SLC2A8Q9NY64 477 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 TMED7Q9Y3B3 224 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 KPTNQ9Y664 436 aa12.35□□□□□ -0.43
GPC1-208ENST00000469694 IGLV3-12A0A075B6K2 115 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 C13orf42A0A1B0GVH6 325 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 H7C1C5 153 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 DOK2O60496 412 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 TSPAN2O60636 221 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 TACR3P29371 465 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 DVL1P1P54792 670 aaPredicted RBP12.34□□□□□ -0.43
GPC1-208ENST00000469694 EMP2P54851 167 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 FBXW4P57775 412 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 LCN6P62502 163 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 PYY3Q5JQD4 70 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 C1QL3Q5VWW1 255 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 ADAM5Q6NVV9 412 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 PAPD4Q6PIY7 484 aaKnown RBP12.34□□□□□ -0.43
GPC1-208ENST00000469694 BTNL8Q6UX41 500 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 CD163Q86VB7 1156 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 STX12Q86Y82 276 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 CASTOR1Q8WTX7 329 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 MRGPRFQ96AM1 343 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 RAB3CQ96E17 227 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 C14orf144Q96I85 54 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 OR5B2Q96R09 309 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 NKX3-1Q99801 234 aaPredicted RBP12.34□□□□□ -0.43
GPC1-208ENST00000469694 PRRT1Q99946 306 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 TBL1XR1Q9BZK7 514 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 ULBP3Q9BZM4 244 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 NMES1Q9C002 83 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 TGIF2Q9GZN2 237 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 COMMD4Q9H0A8 199 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 CACNA1HO95180 2353 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 DBX1A6NMT0 343 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 AGPAT2O15120 278 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 ARPC3O15145 178 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 NME2P22392 152 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 SERPINF1P36955 418 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 OR2B8PP59922 312 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 EGR4Q05215 589 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 HMGN3Q15651 99 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 AWAT2Q6E213 333 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 KDF1Q8NAX2 398 aaPredicted RBP12.34□□□□□ -0.43
GPC1-208ENST00000469694 IP6K3Q96PC2 410 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 POMT1Q9Y6A1 747 aa12.34□□□□□ -0.43
GPC1-208ENST00000469694 MSGN1A6NI15 193 aa12.33□□□□□ -0.44
GPC1-208ENST00000469694 ARGFXA6NJG6 315 aa12.33□□□□□ -0.44
GPC1-208ENST00000469694 TMEM212A6NML5 194 aa12.33□□□□□ -0.44
GPC1-208ENST00000469694 SNRNP70P08621 437 aaKnown RBP12.33□□□□□ -0.44
GPC1-208ENST00000469694 SP9P0CG40 484 aa12.33□□□□□ -0.44
GPC1-208ENST00000469694 MPLP40238 635 aa12.33□□□□□ -0.44
GPC1-208ENST00000469694 GSK3AP49840 483 aa12.33□□□□□ -0.44
GPC1-208ENST00000469694 ADAM8P78325 824 aa12.33□□□□□ -0.44
GPC1-208ENST00000469694 MEF2DQ14814 521 aa12.33□□□□□ -0.44
GPC1-208ENST00000469694 AWAT1Q58HT5 328 aa12.33□□□□□ -0.44
GPC1-208ENST00000469694 WBP2NLQ6ICG8 309 aa12.33□□□□□ -0.44
GPC1-208ENST00000469694 FAHD2BQ6P2I3 314 aaPredicted RBP12.33□□□□□ -0.44
GPC1-208ENST00000469694 ATG4DQ86TL0 474 aaPredicted RBP12.33□□□□□ -0.44
GPC1-208ENST00000469694 ZNF441Q8N8Z8 693 aa12.33□□□□□ -0.44
GPC1-208ENST00000469694 ZDHHC22Q8N966 263 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms