RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 RDH8Q9NYR8 311 aa12.91□□□□□ -0.34
CBWD3-205ENST00000469687 FBLN5Q9UBX5 448 aa12.91□□□□□ -0.34
CBWD3-205ENST00000469687 A0A087WZY1 265 aa12.91□□□□□ -0.34
CBWD3-205ENST00000469687 NSG1A0A0A6YYJ2 146 aa12.91□□□□□ -0.34
CBWD3-205ENST00000469687 OR5H14A6NHG9 310 aa12.91□□□□□ -0.34
CBWD3-205ENST00000469687 ZSCAN5BA6NJL1 495 aa12.91□□□□□ -0.34
CBWD3-205ENST00000469687 DSCR4P56555 118 aaPredicted RBP12.91□□□□□ -0.34
CBWD3-205ENST00000469687 GMFBP60983 142 aa12.91□□□□□ -0.34
CBWD3-205ENST00000469687 GRB2P62993 217 aaKnown RBP12.91□□□□□ -0.34
CBWD3-205ENST00000469687 PGAP1Q75T13 922 aa12.91□□□□□ -0.34
CBWD3-205ENST00000469687 TMEM123Q8N131 208 aa12.91□□□□□ -0.34
CBWD3-205ENST00000469687 M1APQ8TC57 530 aa12.91□□□□□ -0.34
CBWD3-205ENST00000469687 SSC4DQ8WTU2 575 aa12.91□□□□□ -0.34
CBWD3-205ENST00000469687 TMEM54Q969K7 222 aa12.91□□□□□ -0.34
CBWD3-205ENST00000469687 MARVELD3Q96A59 401 aa12.91□□□□□ -0.34
CBWD3-205ENST00000469687 ZC3H10Q96K80 434 aaKnown RBP12.91□□□□□ -0.34
CBWD3-205ENST00000469687 TMEM59Q9BXS4 323 aa12.91□□□□□ -0.34
CBWD3-205ENST00000469687 HPF1Q9NWY4 346 aa12.91□□□□□ -0.34
CBWD3-205ENST00000469687 ZNF224Q9NZL3 707 aa12.91□□□□□ -0.34
CBWD3-205ENST00000469687 DOCK10Q96BY6 2186 aa12.91□□□□□ -0.34
CBWD3-205ENST00000469687 NPIPA2E9PIF3 369 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 NPIPA3F8WFD2 350 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 CRTAPO75718 401 aaPredicted RBP12.9□□□□□ -0.34
CBWD3-205ENST00000469687 B3GALNT1O75752 331 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 SPDEFO95238 335 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 RPA2P15927 270 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 MPGP29372 298 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 AVPR2P30518 371 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 MC2RQ01718 297 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 LPAL2Q16609 132 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 MICBQ29980 383 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 C10orf128Q5T292 105 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 ZNF660Q6AZW8 331 aaPredicted RBP12.9□□□□□ -0.34
CBWD3-205ENST00000469687 LYG2Q86SG7 212 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 ZIC4Q8N9L1 334 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 LRRC20Q8TCA0 184 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 CASTOR1Q8WTX7 329 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 RAB3CQ96E17 227 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 ARHGAP5-AS1Q96IT6 56 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 REG4Q9BYZ8 158 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 KIF25Q9UIL4 384 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 C9orf170A2RU37 121 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 YKT6O15498 198 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 CD8AP01732 235 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 FAHP16930 419 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 AKR1C4P17516 323 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 MPZP25189 248 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 FKBP2P26885 142 aaKnown RBP12.9□□□□□ -0.34
CBWD3-205ENST00000469687 MLF1P58340 268 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 LSM6P62312 80 aaKnown RBP12.9□□□□□ -0.34
CBWD3-205ENST00000469687 CLVS2Q5SYC1 327 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 ZNF546Q86UE3 836 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 DTWD2Q8NBA8 298 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 OR10K1Q8NGX5 313 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 OR4K15Q8NH41 348 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 MARCH1Q8TCQ1 289 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 RBPMSQ93062 196 aaKnown RBP12.9□□□□□ -0.34
CBWD3-205ENST00000469687 NTNG2Q96CW9 530 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 GUCD1Q96NT3 240 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 MICU1Q9BPX6 476 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 PDCD10Q9BUL8 212 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 SLC39A1Q9NY26 324 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 PLEKHA6Q9Y2H5 1048 aa12.9□□□□□ -0.34
CBWD3-205ENST00000469687 PCSK5Q92824 1860 aa12.89□□□□□ -0.35
CBWD3-205ENST00000469687 PMS2P1A4D2B8 440 aa12.89□□□□□ -0.35
CBWD3-205ENST00000469687 IGLV3-1P01715 115 aa12.89□□□□□ -0.35
CBWD3-205ENST00000469687 RLN2P04090 185 aa12.89□□□□□ -0.35
CBWD3-205ENST00000469687 HIST1H1DP16402 221 aaKnown RBP12.89□□□□□ -0.35
CBWD3-205ENST00000469687 VAMP1P23763 118 aa12.89□□□□□ -0.35
CBWD3-205ENST00000469687 NTF4P34130 210 aa12.89□□□□□ -0.35
CBWD3-205ENST00000469687 IL13RA1P78552 427 aa12.89□□□□□ -0.35
CBWD3-205ENST00000469687 GK2Q14410 553 aaPredicted RBP12.89□□□□□ -0.35
CBWD3-205ENST00000469687 UBE2V2Q15819 145 aa12.89□□□□□ -0.35
CBWD3-205ENST00000469687 BEX5Q5H9J7 111 aa12.89□□□□□ -0.35
CBWD3-205ENST00000469687 SIGIRRQ6IA17 410 aa12.89□□□□□ -0.35
CBWD3-205ENST00000469687 TMEM65Q6PI78 240 aa12.89□□□□□ -0.35
CBWD3-205ENST00000469687 OR2W3Q7Z3T1 314 aa12.89□□□□□ -0.35
CBWD3-205ENST00000469687 YRDCQ86U90 279 aaKnown RBP12.89□□□□□ -0.35
CBWD3-205ENST00000469687 KCNG3Q8TAE7 436 aa12.89□□□□□ -0.35
CBWD3-205ENST00000469687 SCARB1Q8WTV0 552 aa12.89□□□□□ -0.35
CBWD3-205ENST00000469687 FBXO17Q96EF6 278 aa12.89□□□□□ -0.35
CBWD3-205ENST00000469687 WDR13Q9H1Z4 485 aa12.89□□□□□ -0.35
CBWD3-205ENST00000469687 SDHAF2Q9NX18 166 aa12.89□□□□□ -0.35
CBWD3-205ENST00000469687 COQ3Q9NZJ6 369 aa12.89□□□□□ -0.35
CBWD3-205ENST00000469687 hCG_1807616A0A1W2PRN6 198 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 FAM25EA8MYX2 175 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 DHHO43323 396 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 IL2RAP01589 272 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 IFNA6P05013 189 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 FOLR3P41439 243 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 GUCA1AP43080 201 aaPredicted RBP12.88□□□□□ -0.35
CBWD3-205ENST00000469687 GSK3AP49840 483 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 ATP1B3P54709 279 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 PRSS12P56730 875 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 Q0VFX4 171 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 ATXN7L3Q14CW9 347 aaPredicted RBP12.88□□□□□ -0.35
CBWD3-205ENST00000469687 KISS1Q15726 138 aa12.88□□□□□ -0.35
CBWD3-205ENST00000469687 PEAR1Q5VY43 1037 aaPredicted RBP12.88□□□□□ -0.35
CBWD3-205ENST00000469687 RGS7BPQ6MZT1 257 aaPredicted RBP12.88□□□□□ -0.35
CBWD3-205ENST00000469687 ZDHHC22Q8N966 263 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms