RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 MRPL41Q8IXM3 137 aaKnown RBP8.92□□□□□ -0.98
NUP50-214ENST00000469163 MFSD9Q8NBP5 474 aa8.92□□□□□ -0.98
NUP50-214ENST00000469163 SLC16A11Q8NCK7 471 aa8.92□□□□□ -0.98
NUP50-214ENST00000469163 ST6GALNAC3Q8NDV1 305 aa8.92□□□□□ -0.98
NUP50-214ENST00000469163 OR52I1Q8NGK6 324 aa8.92□□□□□ -0.98
NUP50-214ENST00000469163 MSL2Q9HCI7 577 aa8.92□□□□□ -0.98
NUP50-214ENST00000469163 PPIAL4AQ9Y536 164 aa8.92□□□□□ -0.98
NUP50-214ENST00000469163 HS3ST3A1Q9Y663 406 aa8.92□□□□□ -0.98
NUP50-214ENST00000469163 KCNE3Q9Y6H6 103 aa8.92□□□□□ -0.98
NUP50-214ENST00000469163 OR5H14A6NHG9 310 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 ZNF705FA8MVS1 300 aaPredicted RBP8.91□□□□□ -0.98
NUP50-214ENST00000469163 TRDCB7Z8K6 153 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 FGF17O60258 216 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 CYC1P08574 325 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 POU2F2P09086 479 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 ZNF705DP0CH99 300 aaPredicted RBP8.91□□□□□ -0.98
NUP50-214ENST00000469163 ZNF705BP0CI00 300 aaPredicted RBP8.91□□□□□ -0.98
NUP50-214ENST00000469163 CD1CP29017 333 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 MC5RP33032 325 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 GIPRP48546 466 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 S100A10P60903 97 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 RAE1P78406 368 aaKnown RBP8.91□□□□□ -0.98
NUP50-214ENST00000469163 TPBGQ13641 420 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 KIAA0040Q15053 153 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 ABHD17CQ6PCB6 329 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 ACOT7LQ6ZUV0 252 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 NUFIP2Q7Z417 695 aaKnown RBP8.91□□□□□ -0.98
NUP50-214ENST00000469163 MUC20Q8N307 709 aaPredicted RBP8.91□□□□□ -0.98
NUP50-214ENST00000469163 ZNF615Q8N8J6 731 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 STXBP6Q8NFX7 210 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 EIF5A2Q9GZV4 153 aaKnown RBP8.91□□□□□ -0.98
NUP50-214ENST00000469163 GLIPR2Q9H4G4 154 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 CLMPQ9H6B4 373 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 SF3B6Q9Y3B4 125 aaKnown RBP8.91□□□□□ -0.98
NUP50-214ENST00000469163 FCMRO60667 390 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 IFNA21P01568 189 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 PRPS1P60891 318 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 DCAF7P61962 342 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 PRSS53Q2L4Q9 553 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 OLFML2AQ68BL7 652 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 ZNF343Q6P1L6 599 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 VN1R4Q7Z5H5 301 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 NR2C2APQ86WQ0 139 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 PLXDC1Q8IUK5 500 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 TMEM19Q96HH6 336 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 DGAT2Q96PD7 388 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 GPR87Q9BY21 358 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 ACTRT3Q9BYD9 372 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 PRTFDC1Q9NRG1 225 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 PLSCR4Q9NRQ2 329 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 KLK11Q9UBX7 282 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 RNF150Q9ULK6 438 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 ACACBO00763 2458 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 TRBC2A0A5B9 178 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 TVP23AA6NH52 213 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 UMAD1C9J7I0 102 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 K7EPK0 472 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 CHRM4P08173 479 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 NID1P14543 1247 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 SNRPBP14678 240 aaKnown RBP8.91□□□□□ -0.98
NUP50-214ENST00000469163 POLR2HP52434 150 aaKnown RBP8.91□□□□□ -0.98
NUP50-214ENST00000469163 NXPH1P58417 271 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 RPS15AP62244 130 aaKnown RBP8.91□□□□□ -0.98
NUP50-214ENST00000469163 RPS18P62269 152 aaKnown RBP8.91□□□□□ -0.98
NUP50-214ENST00000469163 EFNB1P98172 346 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 DUSP2Q05923 314 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 FAM27D1Q5T7N8 215 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 YOD1Q5VVQ6 348 aaPredicted RBP8.91□□□□□ -0.98
NUP50-214ENST00000469163 SFXN4Q6P4A7 337 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 TMPPEQ6ZT21 453 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 CPOQ8IVL8 374 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 FAM71E2Q8N5Q1 922 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 OR4N2Q8NGD1 307 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 DYRK2Q92630 601 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 CNRIP1Q96F85 164 aaPredicted RBP8.91□□□□□ -0.98
NUP50-214ENST00000469163 TXN2Q99757 166 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 SYT4Q9H2B2 425 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 GPATCH2Q9NW75 528 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 ENPP4Q9Y6X5 453 aa8.91□□□□□ -0.98
NUP50-214ENST00000469163 TRAV14DV4A0A0A6YYC5 116 aa8.9□□□□□ -0.98
NUP50-214ENST00000469163 TMEM269A0A1B0GVZ9 245 aa8.9□□□□□ -0.98
NUP50-214ENST00000469163 LMO7DNF2Z398 122 aa8.9□□□□□ -0.98
NUP50-214ENST00000469163 FGF16O43320 207 aa8.9□□□□□ -0.98
NUP50-214ENST00000469163 DUSP8Q13202 625 aa8.9□□□□□ -0.98
NUP50-214ENST00000469163 KIR2DS3Q14952 304 aa8.9□□□□□ -0.98
NUP50-214ENST00000469163 CNN3Q15417 329 aaKnown RBP8.9□□□□□ -0.98
NUP50-214ENST00000469163 HAGHQ16775 308 aa8.9□□□□□ -0.98
NUP50-214ENST00000469163 IQCJQ1A5X6 159 aa8.9□□□□□ -0.98
NUP50-214ENST00000469163 FAM89BQ8N5H3 189 aa8.9□□□□□ -0.98
NUP50-214ENST00000469163 IL22RA1Q8N6P7 574 aa8.9□□□□□ -0.98
NUP50-214ENST00000469163 TMEM52Q8NDY8 209 aa8.9□□□□□ -0.98
NUP50-214ENST00000469163 BPIFA2Q96DR5 249 aa8.9□□□□□ -0.98
NUP50-214ENST00000469163 FAM46AQ96IP4 442 aaKnown RBP8.9□□□□□ -0.98
NUP50-214ENST00000469163 TBL1XR1Q9BZK7 514 aa8.9□□□□□ -0.98
NUP50-214ENST00000469163 ULBP3Q9BZM4 244 aa8.9□□□□□ -0.98
NUP50-214ENST00000469163 WWTR1Q9GZV5 400 aa8.9□□□□□ -0.98
NUP50-214ENST00000469163 MRPS33Q9Y291 106 aaKnown RBP8.9□□□□□ -0.98
NUP50-214ENST00000469163 DOCK7Q96N67 2140 aa8.9□□□□□ -0.98
NUP50-214ENST00000469163 A0A087WUJ7 227 aa8.9□□□□□ -0.99
NUP50-214ENST00000469163 SPAARA0A1B0GVQ0 90 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms