RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 OR5AS1Q8N127 324 aa6.99□□□□□ -1.29
HDAC6-216ENST00000468949 PRSS35Q8N3Z0 413 aa6.99□□□□□ -1.29
HDAC6-216ENST00000468949 BHLHE23Q8NDY6 225 aa6.99□□□□□ -1.29
HDAC6-216ENST00000468949 CSNK2A3Q8NEV1 391 aa6.99□□□□□ -1.29
HDAC6-216ENST00000468949 SEMA6DQ8NFY4 1073 aa6.99□□□□□ -1.29
HDAC6-216ENST00000468949 KLF14Q8TD94 323 aaPredicted RBP6.99□□□□□ -1.29
HDAC6-216ENST00000468949 GHSRQ92847 366 aa6.99□□□□□ -1.29
HDAC6-216ENST00000468949 TMEM203Q969S6 136 aa6.99□□□□□ -1.29
HDAC6-216ENST00000468949 SYT3Q9BQG1 590 aa6.99□□□□□ -1.29
HDAC6-216ENST00000468949 PAPOLGQ9BWT3 736 aaKnown RBP6.99□□□□□ -1.29
HDAC6-216ENST00000468949 SLITRK2Q9H156 845 aa6.99□□□□□ -1.29
HDAC6-216ENST00000468949 PLK3Q9H4B4 646 aa6.99□□□□□ -1.29
HDAC6-216ENST00000468949 ZNF442Q9H7R0 627 aa6.99□□□□□ -1.29
HDAC6-216ENST00000468949 DYNLRB1Q9NP97 96 aa6.99□□□□□ -1.29
HDAC6-216ENST00000468949 CISD1Q9NZ45 108 aaKnown RBP6.99□□□□□ -1.29
HDAC6-216ENST00000468949 ENPP5Q9UJA9 477 aa6.99□□□□□ -1.29
HDAC6-216ENST00000468949 SSR3Q9UNL2 185 aa6.99□□□□□ -1.29
HDAC6-216ENST00000468949 HCFC1P51610 2035 aa6.99□□□□□ -1.29
HDAC6-216ENST00000468949 CELSR2Q9HCU4 2923 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 ITPR2Q14571 2701 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 NBPF19A0A087WUL8 3843 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-216ENST00000468949 ZNF816-ZNF321PA0A0X1KG74 233 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 hCG_38984A0A1B0GV85 526 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 ANXA2P2A6NMY6 339 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 OR4C45A6NMZ5 311 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 SHISA9B4DS77 424 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 ZNF879B4DU55 563 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 HS3ST1O14792 307 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 MAGEB3O15480 346 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 GATBO75879 557 aaKnown RBP6.98□□□□□ -1.29
HDAC6-216ENST00000468949 ISG15P05161 165 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 CD1AP06126 327 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 OR4A8P0C604 315 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 CD36P16671 472 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 JUNBP17275 347 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-216ENST00000468949 TNFSF4P23510 183 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 MYL9P24844 172 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 APOBEC3AP31941 199 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-216ENST00000468949 THBS4P35443 961 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 SERPINF1P36955 418 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 DDOSTP39656 456 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 SOX2P48431 317 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 GSK3AP49840 483 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 RPS25P62851 125 aaKnown RBP6.98□□□□□ -1.29
HDAC6-216ENST00000468949 NKX6-1P78426 367 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-216ENST00000468949 RIPPLY1Q0D2K3 151 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 TPBGQ13641 420 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 RSPO1Q2MKA7 263 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-216ENST00000468949 Q499Y3 187 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 MBNL2Q5VZF2 373 aaKnown RBP6.98□□□□□ -1.29
HDAC6-216ENST00000468949 OR2T2Q6IF00 324 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 PAMR1Q6UXH9 720 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 FBXW12Q6X9E4 464 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 PRSS45Q7RTY3 260 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 PHC2Q8IXK0 858 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 RDH10Q8IZV5 341 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 ZNF485Q8NCK3 441 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 OR56B2PQ8NGI1 322 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 OR8S1Q8NH09 359 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 ITFG2Q969R8 447 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 MRPL24Q96A35 216 aaKnown RBP6.98□□□□□ -1.29
HDAC6-216ENST00000468949 SPSB4Q96A44 273 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 C10orf35Q96D05 121 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 CMBLQ96DG6 245 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 CPNE2Q96FN4 548 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-216ENST00000468949 MARS2Q96GW9 593 aaKnown RBP6.98□□□□□ -1.29
HDAC6-216ENST00000468949 HIST1H2AAQ96QV6 131 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 DHRS9Q9BPW9 319 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 CLEC4MQ9H2X3 399 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-216ENST00000468949 ABCB9Q9NP78 766 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 CYSLTR2Q9NS75 346 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 NDUFB11Q9NX14 153 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 NKIRAS2Q9NYR9 191 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 CGGBP1Q9UFW8 167 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-216ENST00000468949 PURGQ9UJV8 347 aaKnown RBP6.98□□□□□ -1.29
HDAC6-216ENST00000468949 FBXO9Q9UK97 447 aaPredicted RBP6.98□□□□□ -1.29
HDAC6-216ENST00000468949 STUB1Q9UNE7 303 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 PIGLQ9Y2B2 252 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 GSTK1Q9Y2Q3 226 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 TEX15Q9BXT5 2789 aa6.98□□□□□ -1.29
HDAC6-216ENST00000468949 LOC100506127A0A0U1RQW1 187 aa6.97□□□□□ -1.29
HDAC6-216ENST00000468949 LOC390937A0A1W2PQ73 354 aa6.97□□□□□ -1.29
HDAC6-216ENST00000468949 TRIM64CA6NLI5 447 aa6.97□□□□□ -1.29
HDAC6-216ENST00000468949 DHRS7CA6NNS2 312 aa6.97□□□□□ -1.29
HDAC6-216ENST00000468949 CD300LBA8K4G0 201 aa6.97□□□□□ -1.29
HDAC6-216ENST00000468949 M0R233 179 aa6.97□□□□□ -1.29
HDAC6-216ENST00000468949 TPD52L2O43399 206 aaKnown RBP6.97□□□□□ -1.29
HDAC6-216ENST00000468949 ARL6IP5O75915 188 aa6.97□□□□□ -1.29
HDAC6-216ENST00000468949 PLAUP00749 431 aa6.97□□□□□ -1.29
HDAC6-216ENST00000468949 FAHP16930 419 aa6.97□□□□□ -1.29
HDAC6-216ENST00000468949 CCL1P22362 96 aa6.97□□□□□ -1.29
HDAC6-216ENST00000468949 LIPAP38571 399 aa6.97□□□□□ -1.29
HDAC6-216ENST00000468949 MPV17P39210 176 aa6.97□□□□□ -1.29
HDAC6-216ENST00000468949 GP2P55259 537 aaKnown RBP6.97□□□□□ -1.29
HDAC6-216ENST00000468949 FAM3AP98173 230 aa6.97□□□□□ -1.29
HDAC6-216ENST00000468949 TLE4Q04727 773 aa6.97□□□□□ -1.29
HDAC6-216ENST00000468949 MZT1Q08AG7 82 aa6.97□□□□□ -1.29
HDAC6-216ENST00000468949 CNN3Q15417 329 aaKnown RBP6.97□□□□□ -1.29
HDAC6-216ENST00000468949 ALKBH6Q3KRA9 238 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms