RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 VSX1Q9NZR4 365 aaPredicted RBP16.1■□□□□ 0.17
SNAPC3-205ENST00000467062 FARSAQ9Y285 508 aaKnown RBP16.1■□□□□ 0.17
SNAPC3-205ENST00000467062 A8MWP6 167 aa16.1■□□□□ 0.17
SNAPC3-205ENST00000467062 OR8G3PP0DMU2 310 aa16.1■□□□□ 0.17
SNAPC3-205ENST00000467062 CTXN1P60606 82 aa16.1■□□□□ 0.17
SNAPC3-205ENST00000467062 SKP1P63208 163 aa16.1■□□□□ 0.17
SNAPC3-205ENST00000467062 KHDC3LQ587J8 217 aa16.1■□□□□ 0.17
SNAPC3-205ENST00000467062 COL13A1Q5TAT6 717 aaPredicted RBP16.1■□□□□ 0.17
SNAPC3-205ENST00000467062 Q6ZRG5 221 aa16.1■□□□□ 0.17
SNAPC3-205ENST00000467062 ZNF417Q8TAU3 575 aa16.1■□□□□ 0.17
SNAPC3-205ENST00000467062 YPEL4Q96NS1 127 aa16.1■□□□□ 0.17
SNAPC3-205ENST00000467062 ALG12Q9BV10 488 aa16.1■□□□□ 0.17
SNAPC3-205ENST00000467062 CST11Q9H112 138 aa16.1■□□□□ 0.17
SNAPC3-205ENST00000467062 UNKLQ9H9P5 680 aaKnown RBP16.1■□□□□ 0.17
SNAPC3-205ENST00000467062 STARD10Q9Y365 291 aa16.1■□□□□ 0.17
SNAPC3-205ENST00000467062 UNC13CQ8NB66 2214 aa16.1■□□□□ 0.17
SNAPC3-205ENST00000467062 UMAD1C9J7I0 102 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 TAAR5O14804 337 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 OR8U9P0C7N5 309 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 SERPINF1P36955 418 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 MEF2DQ14814 521 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 C14orf28Q4W4Y0 310 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 ARHGAP40Q5TG30 622 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 SHISA6Q6ZSJ9 500 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 ZDHHC22Q8N966 263 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 OR8U1Q8NH10 309 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 OR5AK2Q8NH90 309 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 CASTOR1Q8WTX7 329 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 LRFN5Q96NI6 719 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 AQP10Q96PS8 301 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 SMOC1Q9H4F8 434 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 HDGFL3Q9Y3E1 203 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 C10orf142B7Z368 130 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 ALOX12BO75342 701 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 ADAP1O75689 374 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 PTBP3O95758 552 aaKnown RBP16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 TSPAN15O95858 294 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 HTR2CP28335 458 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 TACR3P29371 465 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 GRK6P43250 576 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 GABRA4P48169 554 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 HSD17B7P56937 341 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 IGLV3-21P80748 117 aaPredicted RBP16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 ZP2Q05996 745 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 ZNF385CQ66K41 422 aaPredicted RBP16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 ZNF529Q6P280 563 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 TSTD1Q8NFU3 115 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 LYPD6BQ8NI32 183 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 GPR61Q9BZJ8 451 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 GPR27Q9NS67 375 aa16.09■□□□□ 0.17
SNAPC3-205ENST00000467062 FREM2Q5SZK8 3169 aa16.08■□□□□ 0.17
SNAPC3-205ENST00000467062 DUS4LO95620 317 aaKnown RBP16.08■□□□□ 0.17
SNAPC3-205ENST00000467062 ADAM8P78325 824 aa16.08■□□□□ 0.17
SNAPC3-205ENST00000467062 NKX6-1P78426 367 aaPredicted RBP16.08■□□□□ 0.17
SNAPC3-205ENST00000467062 HNF4GQ14541 408 aa16.08■□□□□ 0.17
SNAPC3-205ENST00000467062 ZNF674Q2M3X9 581 aa16.08■□□□□ 0.17
SNAPC3-205ENST00000467062 LINC01590Q5TEZ4 76 aa16.08■□□□□ 0.17
SNAPC3-205ENST00000467062 ZNF563Q8TA94 476 aa16.08■□□□□ 0.17
SNAPC3-205ENST00000467062 MR1Q95460 341 aa16.08■□□□□ 0.17
SNAPC3-205ENST00000467062 NKX3-1Q99801 234 aaPredicted RBP16.08■□□□□ 0.17
SNAPC3-205ENST00000467062 SLC6A7Q99884 636 aa16.08■□□□□ 0.17
SNAPC3-205ENST00000467062 SPAG17Q6Q759 2223 aa16.08■□□□□ 0.17
SNAPC3-205ENST00000467062 TACSTD2P09758 323 aa16.08■□□□□ 0.16
SNAPC3-205ENST00000467062 SLC37A1P57057 533 aa16.08■□□□□ 0.16
SNAPC3-205ENST00000467062 RPS23P62266 143 aaKnown RBP16.08■□□□□ 0.16
SNAPC3-205ENST00000467062 ALG10Q5BKT4 473 aa16.08■□□□□ 0.16
SNAPC3-205ENST00000467062 PRSS54Q6PEW0 395 aa16.08■□□□□ 0.16
SNAPC3-205ENST00000467062 LPAR4Q99677 370 aa16.08■□□□□ 0.16
SNAPC3-205ENST00000467062 PDE7BQ9NP56 450 aa16.08■□□□□ 0.16
SNAPC3-205ENST00000467062 SLC2A8Q9NY64 477 aa16.08■□□□□ 0.16
SNAPC3-205ENST00000467062 IGHV1OR15-9A0A0B4J2B8 117 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 TRBV5-5A0A0J9YX44 114 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 UTS2O95399 124 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 RAB6AP20340 208 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 ZNF74Q16587 644 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 GUK1Q16774 197 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 C1orf189Q5VU69 101 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 CARFQ8N187 725 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 OR10AD1Q8NGE0 317 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 CD300LFQ8TDQ1 290 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 ZNF576Q9H609 170 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 SIRT7Q9NRC8 400 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 LOC100289279A0A1B0GTE1 492 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 MSGN1A6NI15 193 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 C11orf98E9PRG8 122 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 H0YIZ8 118 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 SCDO00767 359 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 ZNF432O94892 652 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 NUDT14O95848 222 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 CRYABP02511 175 aaKnown RBP16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 SNRPCP09234 159 aaKnown RBP16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 LYL1P12980 280 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 FGF7P21781 194 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 TSPAN7P41732 249 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 ATG4DQ86TL0 474 aaPredicted RBP16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 M1APQ8TC57 530 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 RNF166Q96A37 237 aaPredicted RBP16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 SPOCK3Q9BQ16 436 aa16.07■□□□□ 0.16
SNAPC3-205ENST00000467062 SLC5A7Q9GZV3 580 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms