RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 C17orf100A8MU93 164 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 E9PI62 339 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 OGG1O15527 345 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 MTRF1O75570 445 aaKnown RBP13.65□□□□□ -0.22
GPC1-207ENST00000466624 DHRS3O75911 302 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 ALDH3B1P43353 468 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 TNK1Q13470 666 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 CDK5R1Q15078 307 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 TBCEQ15813 527 aaPredicted RBP13.65□□□□□ -0.22
GPC1-207ENST00000466624 ZBTB37Q5TC79 503 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 TMEM244Q5VVB8 128 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 DOK3Q7L591 496 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 KLBQ86Z14 1044 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 FTMTQ8N4E7 242 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 OR56B2PQ8NGI1 322 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 GATAD2BQ8WXI9 593 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 TRMT61AQ96FX7 289 aaKnown RBP13.65□□□□□ -0.22
GPC1-207ENST00000466624 SLC30A2Q9BRI3 323 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 GSX2Q9BZM3 304 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 CCDC90BQ9GZT6 254 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 NKIRAS2Q9NYR9 191 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 ZDHHC8Q9ULC8 765 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 NOP16Q9Y3C1 178 aaKnown RBP13.65□□□□□ -0.22
GPC1-207ENST00000466624 POLQO75417 2590 aa13.65□□□□□ -0.22
GPC1-207ENST00000466624 A0A1B0GVI7 797 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 P2RY10O00398 339 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 TNFAIP8O95379 198 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 LALBAP00709 142 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 CD1AP06126 327 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 ERCC1P07992 297 aaPredicted RBP13.64□□□□□ -0.23
GPC1-207ENST00000466624 ZNF12P17014 697 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 ACHEP22303 614 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 CDKN1AP38936 164 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 MAP2K3P46734 347 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 ZNF81P51508 661 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 CHN2P52757 468 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 SPHARQ15513 63 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 DEFB113Q30KQ7 82 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 PCGF3Q3KNV8 242 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 XAF1Q6GPH4 301 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 COMMD2Q86X83 199 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 LRRC75A-AS1Q8N1F1 130 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 SVOPQ8N4V2 548 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 OR13G1Q8NGZ3 307 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 SMIM19Q96E16 107 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 COMMD4Q9H0A8 199 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 RAB1BQ9H0U4 201 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 V9GYS6 101 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 NAV2Q8IVL1 2488 aa13.64□□□□□ -0.23
GPC1-207ENST00000466624 TRBV2A0A0J9YWF9 115 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 LOC107986453A0A1B0GWG9 222 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 ZSCAN5BA6NJL1 495 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 CD55P08174 381 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 NAT2P11245 290 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 ACKR3P25106 362 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 GTF2A1P52655 376 aaPredicted RBP13.63□□□□□ -0.23
GPC1-207ENST00000466624 PRSS12P56730 875 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 RIPPLY1Q0D2K3 151 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 FAM209AQ5JX71 171 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 DMKNQ6E0U4 476 aaPredicted RBP13.63□□□□□ -0.23
GPC1-207ENST00000466624 Q6ZR03 302 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 OR5AS1Q8N127 324 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 ZNF676Q8N7Q3 588 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 BHLHE23Q8NDY6 225 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 SEMA6DQ8NFY4 1073 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 OR14K1Q8NGZ2 314 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 OR5AK2Q8NH90 309 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 NEU4Q8WWR8 484 aaPredicted RBP13.63□□□□□ -0.23
GPC1-207ENST00000466624 C10orf35Q96D05 121 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 SOX7Q9BT81 388 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 ABCB9Q9NP78 766 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 ISYNA1Q9NPH2 558 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 TMEM100Q9NV29 134 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 USF3Q68DE3 2245 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 PDZD2O15018 2839 aa13.63□□□□□ -0.23
GPC1-207ENST00000466624 ZNF816-ZNF321PA0A0X1KG74 233 aa13.62□□□□□ -0.23
GPC1-207ENST00000466624 ANKRD30BLA7E2S9 258 aa13.62□□□□□ -0.23
GPC1-207ENST00000466624 SYT7O43581 403 aa13.62□□□□□ -0.23
GPC1-207ENST00000466624 PLPP2O43688 288 aa13.62□□□□□ -0.23
GPC1-207ENST00000466624 GMDSO60547 372 aa13.62□□□□□ -0.23
GPC1-207ENST00000466624 LILRA1O75019 489 aa13.62□□□□□ -0.23
GPC1-207ENST00000466624 ZFPL1O95159 310 aa13.62□□□□□ -0.23
GPC1-207ENST00000466624 CST4P01036 141 aa13.62□□□□□ -0.23
GPC1-207ENST00000466624 IGHV1-46P01743 117 aa13.62□□□□□ -0.23
GPC1-207ENST00000466624 PTH2RP49190 550 aa13.62□□□□□ -0.23
GPC1-207ENST00000466624 ODF4Q2M2E3 257 aa13.62□□□□□ -0.23
GPC1-207ENST00000466624 ZNF773Q6PK81 442 aa13.62□□□□□ -0.23
GPC1-207ENST00000466624 FAM71F1Q96KD3 344 aaPredicted RBP13.62□□□□□ -0.23
GPC1-207ENST00000466624 SORCS2Q96PQ0 1159 aa13.62□□□□□ -0.23
GPC1-207ENST00000466624 OR5M11Q96RB7 305 aa13.62□□□□□ -0.23
GPC1-207ENST00000466624 VRK1Q99986 396 aaPredicted RBP13.62□□□□□ -0.23
GPC1-207ENST00000466624 BARX1Q9HBU1 254 aaPredicted RBP13.62□□□□□ -0.23
GPC1-207ENST00000466624 MSL2Q9HCI7 577 aa13.62□□□□□ -0.23
GPC1-207ENST00000466624 HHLA2Q9UM44 414 aa13.62□□□□□ -0.23
GPC1-207ENST00000466624 MPC1Q9Y5U8 109 aa13.62□□□□□ -0.23
GPC1-207ENST00000466624 TANC2Q9HCD6 1990 aa13.62□□□□□ -0.23
GPC1-207ENST00000466624 ARID1AO14497 2285 aa13.61□□□□□ -0.23
GPC1-207ENST00000466624 TNFSF4P23510 183 aa13.61□□□□□ -0.23
GPC1-207ENST00000466624 EFNA4P52798 201 aa13.61□□□□□ -0.23
GPC1-207ENST00000466624 EMX1Q04741 257 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms