RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 ARL9Q6T311 187 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 PLXDC2Q6UX71 529 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 TMEM91Q6ZNR0 172 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 USP43Q70EL4 1123 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 CROCCP3Q8IVE0 287 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 CDH26Q8IXH8 852 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 UBE2J2Q8N2K1 259 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 RFLNBQ8N5W9 214 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 WDR31Q8NA23 367 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 NAXEQ8NCW5 288 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 STEAP2Q8NFT2 490 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 KBTBD8Q8NFY9 601 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 OR1J2Q8NGS2 313 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 OR5AK2Q8NH90 309 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 OR1F12Q8NHA8 337 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 FGFBP3Q8TAT2 258 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 DYNC2LI1Q8TCX1 351 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 GPR148Q8TDV2 347 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 RND1Q92730 232 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 POM121L2Q96KW2 1035 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 KCTD7Q96MP8 289 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 FOXN4Q96NZ1 517 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 ALKBH3Q96Q83 286 aaPredicted RBP4.75□□□□□ -1.65
VPS41-211ENST00000466017 NEU1Q99519 415 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 SH3GL3Q99963 347 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 C1QTNF5Q9BXJ0 243 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 NXF2Q9GZY0 626 aaKnown RBP4.75□□□□□ -1.65
VPS41-211ENST00000466017 NAA50Q9GZZ1 169 aaKnown RBP4.75□□□□□ -1.65
VPS41-211ENST00000466017 WNT5BQ9H1J7 359 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 RGCCQ9H4X1 137 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 ACOXLQ9NUZ1 547 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 TBCCD1Q9NVR7 557 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 FAM206AQ9NX38 181 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 PLEK2Q9NYT0 353 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 PTTG2Q9NZH5 202 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 LUZP4Q9P127 313 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 HHLA2Q9UM44 414 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 FOXJ3Q9UPW0 622 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 SLC22A13Q9Y226 551 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 POLR1DQ9Y2S0 133 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 AMDHD2Q9Y303 409 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 MEMO1Q9Y316 297 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 AKAP13Q12802 2813 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 POLEQ07864 2286 aa4.75□□□□□ -1.65
VPS41-211ENST00000466017 INTS1Q8N201 2190 aaKnown RBP4.74□□□□□ -1.65
VPS41-211ENST00000466017 A0A075B6Q4 140 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 A0A1B0GTI1 187 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 IQCMA0A1B0GVH7 501 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 CIB4A0PJX0 185 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 CCDC160A6NGH7 325 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 OR5H1A6NKK0 313 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 ZNF879B4DU55 563 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 M0R135 149 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 PIN1P1O15428 100 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 ZNHIT1O43257 154 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 DOK2O60496 412 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 IGLV1-44P01699 117 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 IGHV3-9P01782 118 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 TTRP02766 147 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 ACSM4P0C7M7 580 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 B4GALT1P15291 398 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 PPP3CBP16298 524 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 ZNF14P17017 642 aaPredicted RBP4.74□□□□□ -1.65
VPS41-211ENST00000466017 SRMP19623 302 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 AGAP20933 346 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 CFL1P23528 166 aaKnown RBP4.74□□□□□ -1.65
VPS41-211ENST00000466017 HSD11B1P28845 292 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 PCSK6P29122 969 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 APOBEC3AP31941 199 aaPredicted RBP4.74□□□□□ -1.65
VPS41-211ENST00000466017 PSMB10P40306 273 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 KIR3DL2P43630 455 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 GZMKP49863 264 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 UBE2NP61088 152 aaKnown RBP4.74□□□□□ -1.65
VPS41-211ENST00000466017 RPS25P62851 125 aaKnown RBP4.74□□□□□ -1.65
VPS41-211ENST00000466017 SLC3A1Q07837 685 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 LY6DQ14210 128 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 SPCS2Q15005 226 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 DGUOKQ16854 277 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 GSG1Q2KHT4 349 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 SLC25A35Q3KQZ1 300 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 SOWAHCQ53LP3 525 aaPredicted RBP4.74□□□□□ -1.65
VPS41-211ENST00000466017 C19orf54Q5BKX5 351 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 PABPC1L2AQ5JQF8 200 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 ZNF474Q6S9Z5 364 aaPredicted RBP4.74□□□□□ -1.65
VPS41-211ENST00000466017 STAC2Q6ZMT1 411 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 DOK3Q7L591 496 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 CEACAM19Q7Z692 300 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 GCNT2Q8N0V5 402 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 PRSS35Q8N3Z0 413 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 LRRC18Q8N456 261 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 PARP16Q8N5Y8 322 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 ZNF283Q8N7M2 679 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 ZNF676Q8N7Q3 588 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 CNEP1R1Q8N9A8 125 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 CPEB3Q8NE35 698 aaKnown RBP4.74□□□□□ -1.65
VPS41-211ENST00000466017 ASB5Q8WWX0 329 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 RPL3LQ92901 407 aaKnown RBP4.74□□□□□ -1.65
VPS41-211ENST00000466017 SPSB4Q96A44 273 aa4.74□□□□□ -1.65
VPS41-211ENST00000466017 TRMT61AQ96FX7 289 aaKnown RBP4.74□□□□□ -1.65
VPS41-211ENST00000466017 ZNF799Q96GE5 643 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms