RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 HES2Q9Y543 173 aa2.36□□□□□ -2.03
CLK1-208ENST00000464454 KIF26AQ9ULI4 1882 aaPredicted RBP2.36□□□□□ -2.03
CLK1-208ENST00000464454 IGLV2-18A0A075B6J9 118 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 IGHV3-72A0A0B4J1Y9 119 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 IGHV7-4-1A0A0J9YVY3 117 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 CENPVL3A0A0U1RRI6 287 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 SLC22A20A6NK97 555 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 OR5H1A6NKK0 313 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 COLCA2A8K830 154 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 ZNF850A8MQ14 1090 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 ZNF99A8MXY4 864 aaPredicted RBP2.35□□□□□ -2.03
CLK1-208ENST00000464454 RRP8O43159 456 aaKnown RBP2.35□□□□□ -2.03
CLK1-208ENST00000464454 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 RBBP9O75884 186 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 IL4P05112 153 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 TUBG1P23258 451 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 CD70P32970 193 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 PCK1P35558 622 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 GGT2P36268 569 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 BCAP31P51572 246 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 SIGLEC14Q08ET2 396 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 HADHQ16836 314 aaKnown RBP2.35□□□□□ -2.03
CLK1-208ENST00000464454 TPRG1LQ5T0D9 272 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 CD300LGQ6UXG3 332 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 PP632Q6XCG6 107 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 TMPRSS11AQ6ZMR5 421 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 NEGR1Q7Z3B1 354 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 ZNF561Q8N587 486 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 TRAM1L1Q8N609 369 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 ZNF615Q8N8J6 731 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 OR5T3Q8NGG3 340 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 RXFP4Q8TDU9 374 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 C17orf50Q8WW18 174 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 DEDD2Q8WXF8 326 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 SCGB3A2Q96PL1 93 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 TEAD3Q99594 435 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 TIMM29Q9BSF4 260 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 SCRT1Q9BWW7 348 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 NAA50Q9GZZ1 169 aaKnown RBP2.35□□□□□ -2.03
CLK1-208ENST00000464454 PRSS16Q9NQE7 514 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 TUBG2Q9NRH3 451 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 ADA2Q9NZK5 511 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 NEURL4Q96JN8 1562 aa2.35□□□□□ -2.03
CLK1-208ENST00000464454 BRCA1P38398 1863 aaKnown RBP2.35□□□□□ -2.03
CLK1-208ENST00000464454 IGLV3-12A0A075B6K2 115 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 H0YC42 278 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 H3BN98 237 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 PTHP01270 115 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 HLA-DQB1P01920 261 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 CATP04040 527 aaKnown RBP2.34□□□□□ -2.03
CLK1-208ENST00000464454 PRKACAP17612 351 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 SRMP19623 302 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 PMCHP20382 165 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 LOXP28300 417 aaPredicted RBP2.34□□□□□ -2.03
CLK1-208ENST00000464454 BMI1P35226 326 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 PSMD4P55036 377 aaKnown RBP2.34□□□□□ -2.03
CLK1-208ENST00000464454 CLDN6P56747 220 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 TAS2R39P59534 338 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 OR2B8PP59922 312 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 KRTAP10-1P60331 282 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 ATP6V0D1P61421 351 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 LCN2P80188 198 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 IFITM3Q01628 133 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 ULK3Q6PHR2 472 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 OPN5Q6U736 354 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 RAB43Q86YS6 212 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 GATSQ8NAP1 163 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 OR4M1Q8NGD0 313 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 OR13G1Q8NGZ3 307 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 ZNF442Q9H7R0 627 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 REEP1Q9H902 201 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 TREX1Q9NSU2 369 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 COMMD3-BMI1R4GMX3 469 aa2.34□□□□□ -2.03
CLK1-208ENST00000464454 ANKRD12Q6UB98 2062 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 TSPOAP1O95153 1857 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 COL27A1Q8IZC6 1860 aaPredicted RBP2.33□□□□□ -2.04
CLK1-208ENST00000464454 IGKV1-27A0A075B6S5 117 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 SPRR5A0A1B0GTR4 108 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 GOLGA8JA6NMD2 632 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 HACD1B0YJ81 288 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 PLIN3O60664 434 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 CTNSO60931 367 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 SERPINB7O75635 380 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 IGLV3-25P01717 112 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 MT-ND4P03905 459 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 GOLGA8HP0CJ92 632 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 GABRR2P28476 465 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 APLNRP35414 380 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 CCNG1P51959 295 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 NAB1Q13506 487 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 TSC22D1Q15714 1073 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 PRSS8Q16651 343 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 TEX30Q5JUR7 227 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 MLIPQ5VWP3 458 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 OR2T5Q6IEZ7 315 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 GUSBP11Q6P575 273 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 LINC00336Q6ZUF6 198 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 VTCN1Q7Z7D3 282 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 HMGN2P46Q86SG4 172 aa2.33□□□□□ -2.04
CLK1-208ENST00000464454 LINC00523Q86TU6 105 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms