RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 RAB4BP61018 213 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 RIPPLY1Q0D2K3 151 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 OR2B11Q5JQS5 317 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 SLC25A30Q5SVS4 291 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 HIST2H3PS2Q5TEC6 136 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 C11orf87Q6NUJ2 197 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 OR2W3Q7Z3T1 314 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 MAML2Q8IZL2 1156 aaPredicted RBP8.13□□□□□ -1.11
HPS4-208ENST00000464362 PLPP5Q8NEB5 264 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 SLC30A7Q8NEW0 376 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 OR1S2Q8NGQ3 325 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 OR51F2Q8NH61 342 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 TERB2Q8NHR7 220 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 NAT6Q93015 286 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 CPNE4Q96A23 557 aaPredicted RBP8.13□□□□□ -1.11
HPS4-208ENST00000464362 LIN37Q96GY3 246 aaPredicted RBP8.13□□□□□ -1.11
HPS4-208ENST00000464362 C10orf90Q96M02 699 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 AMELYQ99218 206 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 CNTD2Q9H8S5 307 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 NOSIPQ9Y314 301 aaKnown RBP8.13□□□□□ -1.11
HPS4-208ENST00000464362 FLVCR1Q9Y5Y0 555 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 PCNX1Q96RV3 2341 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 IFNA17P01571 189 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 GALP22466 123 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 RPL12P30050 165 aaKnown RBP8.13□□□□□ -1.11
HPS4-208ENST00000464362 KIR2DL1P43626 348 aaPredicted RBP8.13□□□□□ -1.11
HPS4-208ENST00000464362 ZNF626Q68DY1 528 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 LPCAT3Q6P1A2 487 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 DOK3Q7L591 496 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 EXD3Q8N9H8 876 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 WDSUB1Q8N9V3 476 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 SEMA6DQ8NFY4 1073 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 GHITMQ9H3K2 345 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 UNKLQ9H9P5 680 aaKnown RBP8.13□□□□□ -1.11
HPS4-208ENST00000464362 EXOSC3Q9NQT5 275 aaKnown RBP8.13□□□□□ -1.11
HPS4-208ENST00000464362 TRAPPC2LQ9UL33 140 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 MCTS1Q9ULC4 181 aaKnown RBP8.13□□□□□ -1.11
HPS4-208ENST00000464362 WIF1Q9Y5W5 379 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 MED13LQ71F56 2210 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 PLXNA1Q9UIW2 1896 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 RFPL4AA6NLU0 287 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 LMO7DNF2Z398 122 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 RFPL4AL1F8VTS6 287 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 IL5P05113 134 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 RAC2P15153 192 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 IL2RGP31785 369 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 TUSC1Q2TAM9 212 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 TMEM123Q8N131 208 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 OR52H1Q8NGJ2 320 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 LILRB1Q8NHL6 650 aaPredicted RBP8.13□□□□□ -1.11
HPS4-208ENST00000464362 RNF128Q8TEB7 428 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 ROBO4Q8WZ75 1007 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 OCSTAMPQ9BR26 566 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 ENY2Q9NPA8 101 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 FSCN3Q9NQT6 498 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 ZFP57Q9NU63 452 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 OPN4Q9UHM6 478 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 BRCA2P51587 3418 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 NYNRINQ9P2P1 1898 aaKnown RBP8.13□□□□□ -1.11
HPS4-208ENST00000464362 FREM3P0C091 2139 aa8.13□□□□□ -1.11
HPS4-208ENST00000464362 GPR31O00270 319 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 ADAM10O14672 748 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 EPPINO95925 133 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 NGFRP08138 427 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 CHATP28329 748 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 ARG2P78540 354 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 KLF9Q13886 244 aaPredicted RBP8.12□□□□□ -1.11
HPS4-208ENST00000464362 TRIM61Q5EBN2 209 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 DCAF12L2Q5VW00 463 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 PTCRAQ6ISU1 281 aaPredicted RBP8.12□□□□□ -1.11
HPS4-208ENST00000464362 OR1N1Q8NGS0 311 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 SGK3Q96BR1 496 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 TRAF4Q9BUZ4 470 aaPredicted RBP8.12□□□□□ -1.11
HPS4-208ENST00000464362 GCM1Q9NP62 436 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 OBP2BQ9NPH6 170 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 UFSP2Q9NUQ7 469 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 ST6GALNAC2Q9UJ37 374 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 CASP8AP2Q9UKL3 1982 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 A0A0B4J293 547 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 WDR1O75083 606 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 ENPP1P22413 925 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 MECP2P51608 486 aaKnown RBP8.12□□□□□ -1.11
HPS4-208ENST00000464362 SLC25A1P53007 311 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 NDUFA6P56556 154 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 PIGPP57054 158 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 RPL23AP62750 156 aaKnown RBP8.12□□□□□ -1.11
HPS4-208ENST00000464362 OR8G2PQ6IF36 304 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 VHLLQ6RSH7 139 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 SLC25A26Q70HW3 274 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 OR2G3Q8NGZ4 309 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 RBMXL1Q96E39 390 aaKnown RBP8.12□□□□□ -1.11
HPS4-208ENST00000464362 ZC3HAV1LQ96H79 300 aaKnown RBP8.12□□□□□ -1.11
HPS4-208ENST00000464362 DUSP23Q9BVJ7 150 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 FN3KRPQ9HA64 309 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 CBY1Q9Y3M2 126 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 PDCD11Q14690 1871 aaKnown RBP8.12□□□□□ -1.11
HPS4-208ENST00000464362 PKDREJQ9NTG1 2253 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 A0A1W2PQF6 199 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 ST8SIA3O43173 380 aa8.12□□□□□ -1.11
HPS4-208ENST00000464362 CST7O76096 145 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms