RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 PRB3Q04118 309 aaPredicted RBP17.01■□□□□ 0.31
CPSF7-209ENST00000463244 WDR38Q5JTN6 314 aa17.01■□□□□ 0.31
CPSF7-209ENST00000463244 KPRPQ5T749 579 aaPredicted RBP17.01■□□□□ 0.31
CPSF7-209ENST00000463244 SLC35E4Q6ICL7 350 aa17.01■□□□□ 0.31
CPSF7-209ENST00000463244 WDR86Q86TI4 376 aa17.01■□□□□ 0.31
CPSF7-209ENST00000463244 OR5R1Q8NH85 324 aa17.01■□□□□ 0.31
CPSF7-209ENST00000463244 LRRC29Q8WV35 223 aa17.01■□□□□ 0.31
CPSF7-209ENST00000463244 KCTD14Q9BQ13 255 aaPredicted RBP17.01■□□□□ 0.31
CPSF7-209ENST00000463244 NSRP1Q9H0G5 558 aaKnown RBP17.01■□□□□ 0.31
CPSF7-209ENST00000463244 FBLN5Q9UBX5 448 aa17.01■□□□□ 0.31
CPSF7-209ENST00000463244 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17■□□□□ 0.31
CPSF7-209ENST00000463244 NPFFO15130 113 aa17■□□□□ 0.31
CPSF7-209ENST00000463244 GPR37O15354 613 aa17■□□□□ 0.31
CPSF7-209ENST00000463244 OPN1MWP04001 364 aa17■□□□□ 0.31
CPSF7-209ENST00000463244 OPN1MW2P0DN77 364 aa17■□□□□ 0.31
CPSF7-209ENST00000463244 OPN1MW3P0DN78 364 aa17■□□□□ 0.31
CPSF7-209ENST00000463244 PSKH1P11801 424 aa17■□□□□ 0.31
CPSF7-209ENST00000463244 KRT72Q14CN4 511 aa17■□□□□ 0.31
CPSF7-209ENST00000463244 SAMD5Q5TGI4 173 aa17■□□□□ 0.31
CPSF7-209ENST00000463244 SLC36A1Q7Z2H8 476 aa17■□□□□ 0.31
CPSF7-209ENST00000463244 FAM216BQ8N7L0 139 aa17■□□□□ 0.31
CPSF7-209ENST00000463244 FAM86B1Q8N7N1 296 aa17■□□□□ 0.31
CPSF7-209ENST00000463244 Q8N7P7 452 aa17■□□□□ 0.31
CPSF7-209ENST00000463244 OR4C15Q8NGM1 316 aa17■□□□□ 0.31
CPSF7-209ENST00000463244 PRPF19Q9UMS4 504 aaKnown RBP17■□□□□ 0.31
CPSF7-209ENST00000463244 ANKRD61A6NGH8 418 aa16.99■□□□□ 0.31
CPSF7-209ENST00000463244 COX4I1P13073 169 aa16.99■□□□□ 0.31
CPSF7-209ENST00000463244 PYCR1P32322 319 aa16.99■□□□□ 0.31
CPSF7-209ENST00000463244 GRK5P34947 590 aa16.99■□□□□ 0.31
CPSF7-209ENST00000463244 DDOSTP39656 456 aa16.99■□□□□ 0.31
CPSF7-209ENST00000463244 DLX1P56177 255 aa16.99■□□□□ 0.31
CPSF7-209ENST00000463244 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.99■□□□□ 0.31
CPSF7-209ENST00000463244 HERPUD1Q15011 391 aa16.99■□□□□ 0.31
CPSF7-209ENST00000463244 WDR82Q6UXN9 313 aa16.99■□□□□ 0.31
CPSF7-209ENST00000463244 Q6ZTK2 550 aa16.99■□□□□ 0.31
CPSF7-209ENST00000463244 OR8S1Q8NH09 359 aa16.99■□□□□ 0.31
CPSF7-209ENST00000463244 TNFRSF14Q92956 283 aa16.99■□□□□ 0.31
CPSF7-209ENST00000463244 SPSB4Q96A44 273 aa16.99■□□□□ 0.31
CPSF7-209ENST00000463244 C12orf43Q96C57 262 aaKnown RBP16.99■□□□□ 0.31
CPSF7-209ENST00000463244 COPS4Q9BT78 406 aa16.99■□□□□ 0.31
CPSF7-209ENST00000463244 DCTN5Q9BTE1 182 aa16.99■□□□□ 0.31
CPSF7-209ENST00000463244 DCAF13Q9NV06 445 aaKnown RBP16.99■□□□□ 0.31
CPSF7-209ENST00000463244 DNAJB11Q9UBS4 358 aa16.99■□□□□ 0.31
CPSF7-209ENST00000463244 TVP23AA6NH52 213 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 ANKRD30BLA7E2S9 258 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 NDUFAB1O14561 156 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 ACOT8O14734 319 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 XRCC2O43543 280 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 NDUFB3O43676 98 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 PAHP00439 452 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 SLC2A1P11166 492 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 GABRA5P31644 462 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 SAA4P35542 130 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 PRKXP51817 358 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 CSNK2BP67870 215 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 KLRD1Q13241 179 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 SLC35F1Q5T1Q4 408 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 Q6ZPA2 131 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 DPY19L4Q7Z388 723 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 DCXRQ7Z4W1 244 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 ZDHHC21Q8IVQ6 265 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 PROKR2Q8NFJ6 384 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 OR1M1Q8NGA1 313 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 C8orf46Q8TAG6 207 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 ZNRF4Q8WWF5 429 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 SEH1LQ96EE3 360 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 DDOQ99489 341 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 KCNJ15Q99712 375 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 PPA2Q9H2U2 334 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 VIPAS39Q9H9C1 493 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 ABCD2Q9UBJ2 740 aa16.98■□□□□ 0.31
CPSF7-209ENST00000463244 SAMD4AQ9UPU9 718 aaKnown RBP16.98■□□□□ 0.31
CPSF7-209ENST00000463244 A0A1W2PRD5 423 aa16.97■□□□□ 0.31
CPSF7-209ENST00000463244 A0A1W2PRF3 423 aa16.97■□□□□ 0.31
CPSF7-209ENST00000463244 A0A1W2PRM7 423 aa16.97■□□□□ 0.31
CPSF7-209ENST00000463244 MEIOCA2RUB1 952 aa16.97■□□□□ 0.31
CPSF7-209ENST00000463244 ALX3O95076 343 aa16.97■□□□□ 0.31
CPSF7-209ENST00000463244 AMY2BP19961 511 aa16.97■□□□□ 0.31
CPSF7-209ENST00000463244 TGM4P49221 684 aa16.97■□□□□ 0.31
CPSF7-209ENST00000463244 SMIM11AP58511 58 aa16.97■□□□□ 0.31
CPSF7-209ENST00000463244 IKZF1Q13422 519 aa16.97■□□□□ 0.31
CPSF7-209ENST00000463244 LYPD4Q6UWN0 246 aa16.97■□□□□ 0.31
CPSF7-209ENST00000463244 HACD2Q6Y1H2 254 aa16.97■□□□□ 0.31
CPSF7-209ENST00000463244 HDXQ7Z353 690 aa16.97■□□□□ 0.31
CPSF7-209ENST00000463244 CYB561A3Q8NBI2 242 aa16.97■□□□□ 0.31
CPSF7-209ENST00000463244 EFCAB1Q9HAE3 211 aa16.97■□□□□ 0.31
CPSF7-209ENST00000463244 N6AMT1Q9Y5N5 214 aa16.97■□□□□ 0.31
CPSF7-209ENST00000463244 COMMD3-BMI1R4GMX3 469 aa16.97■□□□□ 0.31
CPSF7-209ENST00000463244 TIPRLO75663 272 aa16.96■□□□□ 0.31
CPSF7-209ENST00000463244 GADD45GO95257 159 aa16.96■□□□□ 0.31
CPSF7-209ENST00000463244 PRB2P02812 416 aaPredicted RBP16.96■□□□□ 0.31
CPSF7-209ENST00000463244 GSSP48637 474 aa16.96■□□□□ 0.31
CPSF7-209ENST00000463244 UBE2E1P51965 193 aa16.96■□□□□ 0.31
CPSF7-209ENST00000463244 EFNB2P52799 333 aa16.96■□□□□ 0.31
CPSF7-209ENST00000463244 FAM3AP98173 230 aa16.96■□□□□ 0.31
CPSF7-209ENST00000463244 SPIBQ01892 262 aa16.96■□□□□ 0.31
CPSF7-209ENST00000463244 LRRC10Q5BKY1 277 aa16.96■□□□□ 0.31
CPSF7-209ENST00000463244 ATPAF1Q5TC12 328 aaPredicted RBP16.96■□□□□ 0.31
CPSF7-209ENST00000463244 STUMQ69YW2 141 aa16.96■□□□□ 0.31
CPSF7-209ENST00000463244 GLYATQ6IB77 296 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms