RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 CXCL3P19876 107 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 CCL1P22362 96 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 GIFP27352 417 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 MNDAP41218 407 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 TSPO2Q5TGU0 170 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 DOK3Q7L591 496 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 NAA40Q86UY6 237 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 SIAH3Q8IW03 269 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 TUSC5Q8IXB3 177 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 OR11H4Q8NGC9 324 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 OR13C9Q8NGT0 318 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 SPTSSAQ969W0 71 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 CALHM2Q9HA72 323 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 COPZ2Q9P299 210 aa12.69□□□□□ -0.38
HDAC6-213ENST00000462730 E9PLN8 166 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 M0R135 149 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 CTAG2O75638 210 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 TPOP07202 933 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 RAB3AP20336 220 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 GDNFP39905 211 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 SCRN3Q0VDG4 424 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 RSPO1Q2MKA7 263 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-213ENST00000462730 C1orf100Q5SVJ3 147 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 ZNF774Q6NX45 483 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 ANKRD16Q6P6B7 361 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 ZNF813Q6ZN06 617 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 CHMP1BQ7LBR1 199 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 SPACA3Q8IXA5 215 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 SLC22A24Q8N4F4 322 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 ZADH2Q8N4Q0 377 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 ZNF680Q8NEM1 530 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 OR5D14Q8NGL3 314 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 OR52I2Q8NH67 350 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 ZNF799Q96GE5 643 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 PLEKHA1Q9HB21 404 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 SSUH2Q9Y2M2 353 aa12.68□□□□□ -0.38
HDAC6-213ENST00000462730 LOC390937A0A1W2PQ73 354 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 GABARAPH6UMI1 98 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 PTHLHP12272 177 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 ABOP16442 354 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 ZNF32P17041 273 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 CTRB1P17538 263 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 OTX1P32242 354 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-213ENST00000462730 TOR2AQ5JU69 321 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 CTRB2Q6GPI1 263 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 IGFL3Q6UXB1 125 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 BIVMQ86UB2 503 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 OR52N4Q8NGI2 321 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 FOXRED1Q96CU9 486 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-213ENST00000462730 LYZL4Q96KX0 146 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 SORCS2Q96PQ0 1159 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 CACNG6Q9BXT2 260 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 LINC00470Q9BZP3 86 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 TMEM138Q9NPI0 162 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 SLC17A5Q9NRA2 495 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 PARPBPQ9NWS1 579 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 APC2O95996 2303 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 ZNF724A8MTY0 619 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 XRCC3O43542 346 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 SYNGR3O43761 229 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 APOC1P02654 83 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 PATE4P0C8F1 98 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 C4BPBP20851 252 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 KLF9Q13886 244 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-213ENST00000462730 ZNF169Q14929 603 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-213ENST00000462730 GSG1Q2KHT4 349 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 ZNF529Q6P280 563 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 SLC16A14Q7RTX9 510 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 ADGRE4PQ86SQ3 457 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 LYPD6Q86Y78 171 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 MCEMP1Q8IX19 187 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 OR8H3Q8N146 312 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 OR4D6Q8NGJ1 314 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 OR1F12Q8NHA8 337 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 AKR7LQ8NHP1 331 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 LRRC20Q8TCA0 184 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 C15orf40Q8WUR7 153 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 FCAMRQ8WWV6 532 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 WDYHV1Q96HA8 205 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 AIFM2Q9BRQ8 373 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 ATG5Q9H1Y0 275 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 HEXA-AS1Q9H8Q6 139 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 SLC7A10Q9NS82 523 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 RHBDD3Q9Y3P4 386 aa12.67□□□□□ -0.38
HDAC6-213ENST00000462730 A0A0U1RQV5 110 aa12.66□□□□□ -0.38
HDAC6-213ENST00000462730 GGT3PA6NGU5 568 aa12.66□□□□□ -0.38
HDAC6-213ENST00000462730 KDM4BO94953 1096 aa12.66□□□□□ -0.38
HDAC6-213ENST00000462730 IGHG3P01860 377 aa12.66□□□□□ -0.38
HDAC6-213ENST00000462730 PDGFAP04085 211 aa12.66□□□□□ -0.38
HDAC6-213ENST00000462730 CRYGSP22914 178 aa12.66□□□□□ -0.38
HDAC6-213ENST00000462730 CCR6P51684 374 aa12.66□□□□□ -0.38
HDAC6-213ENST00000462730 RAG2P55895 527 aa12.66□□□□□ -0.38
HDAC6-213ENST00000462730 PCBD1P61457 104 aa12.66□□□□□ -0.38
HDAC6-213ENST00000462730 MRPS10P82664 201 aaKnown RBP12.66□□□□□ -0.38
HDAC6-213ENST00000462730 ECH1Q13011 328 aa12.66□□□□□ -0.38
HDAC6-213ENST00000462730 RNPS1Q15287 305 aaKnown RBP12.66□□□□□ -0.38
HDAC6-213ENST00000462730 SFRP5Q5T4F7 317 aa12.66□□□□□ -0.38
HDAC6-213ENST00000462730 OR14K1Q8NGZ2 314 aa12.66□□□□□ -0.38
HDAC6-213ENST00000462730 CNTD2Q9H8S5 307 aa12.66□□□□□ -0.38
HDAC6-213ENST00000462730 RNF122Q9H9V4 155 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms