RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 RGCCQ9H4X1 137 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 MARCH7Q9H992 704 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 S100A14Q9HCY8 104 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 ABCB9Q9NP78 766 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 MMP26Q9NRE1 261 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 CMC2Q9NRP2 79 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 DNAJC27Q9NZQ0 273 aa7.44□□□□□ -1.22
LDB1-203ENST00000461873 H2AFY2Q9P0M6 372 aaPredicted RBP7.44□□□□□ -1.22
LDB1-203ENST00000461873 POLR3KQ9Y2Y1 108 aaPredicted RBP7.44□□□□□ -1.22
LDB1-203ENST00000461873 ARHGAP32A7KAX9 2087 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 IGHV2-70DA0A0C4DH43 119 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 ARRDC5A6NEK1 342 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 OOEPA6NGQ2 149 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 AQP12BA6NM10 295 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 C3orf80F5H4A9 247 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 H3BNX3 289 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 TRAPPC2LH3BP13 241 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 LGALS8O00214 317 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 ADAM20O43506 726 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 GLCEO94923 617 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 FSTL3O95633 263 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 LYNP07948 512 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 ANXA8P13928 327 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 BPIFB3P59826 476 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 SEC61A1P61619 476 aaKnown RBP7.43□□□□□ -1.22
LDB1-203ENST00000461873 IL5RAQ01344 420 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 MICBQ29980 383 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 SNAI3Q3KNW1 292 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 TEX30Q5JUR7 227 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 GLYATL3Q5SZD4 288 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 LCN1P1Q5VSP4 162 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 KCTD18Q6PI47 426 aaPredicted RBP7.43□□□□□ -1.22
LDB1-203ENST00000461873 C1orf229Q6ZS94 237 aaPredicted RBP7.43□□□□□ -1.22
LDB1-203ENST00000461873 FAM57BQ71RH2 274 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 KRT77Q7Z794 578 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 AQP12AQ8IXF9 295 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 TIGD4Q8IY51 512 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 ADGRG5Q8IZF4 528 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 SIGLECL1Q8N7X8 197 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 PAPD5Q8NDF8 572 aaKnown RBP7.43□□□□□ -1.22
LDB1-203ENST00000461873 OR56B2PQ8NGI1 322 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 SGMS2Q8NHU3 365 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 Q8TCH9 128 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 LRTOMTQ8WZ04 291 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 REEP6Q96HR9 211 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 PCGF1Q9BSM1 259 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 PAPOLGQ9BWT3 736 aaKnown RBP7.43□□□□□ -1.22
LDB1-203ENST00000461873 PNRC2Q9NPJ4 139 aaKnown RBP7.43□□□□□ -1.22
LDB1-203ENST00000461873 DNAJB11Q9UBS4 358 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 LAMP5Q9UJQ1 280 aa7.43□□□□□ -1.22
LDB1-203ENST00000461873 IGHV3OR16-10A0A075B7F0 116 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 TRAV40A0A0B4J280 105 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 KIR2DS1A0A191URI9 304 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 TMEM89A2RUT3 159 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 NKX6-3A6NJ46 265 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 FAM183AA6NL82 134 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 F5H0A9 414 aaPredicted RBP7.42□□□□□ -1.22
LDB1-203ENST00000461873 TMPRSS2O15393 492 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 FKBP6O75344 327 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 ECDO95905 644 aaPredicted RBP7.42□□□□□ -1.22
LDB1-203ENST00000461873 PPIAL4GP0DN37 164 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 CLUP10909 449 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 OSMP13725 252 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 PRTN3P24158 256 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 CFPP27918 469 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 UBA52P62987 128 aaKnown RBP7.42□□□□□ -1.22
LDB1-203ENST00000461873 PAX8Q06710 450 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 MAB21L1Q13394 359 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 GINS1Q14691 196 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 SNAPC1Q16533 368 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 KRTAP27-1Q3LI81 207 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 FAM201AQ5SY85 155 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 WDR25Q64LD2 544 aaPredicted RBP7.42□□□□□ -1.22
LDB1-203ENST00000461873 ZNF770Q6IQ21 691 aaPredicted RBP7.42□□□□□ -1.22
LDB1-203ENST00000461873 PLBD1Q6P4A8 553 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 CD300LDQ6UXZ3 194 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 RHOUQ7L0Q8 258 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 SLC16A9Q7RTY1 509 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 SLC36A1Q7Z2H8 476 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 THAP5Q7Z6K1 395 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 CMTM4Q8IZR5 234 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 IQCF1Q8N6M8 205 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 SCCPDHQ8NBX0 429 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 C19orf18Q8NEA5 215 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 OR8D4Q8NGM9 314 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 OR4Q3Q8NH05 313 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 DNAJC9Q8WXX5 260 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 ST8SIA4Q92187 359 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 PKP2Q99959 881 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 NIPSNAP1Q9BPW8 284 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 ABHD6Q9BV23 337 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 RTL8AQ9BWD3 113 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 MROQ9BYG7 248 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 SEMA6AQ9H2E6 1030 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 NIPAL2Q9H841 368 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 ZNF69Q9UC07 566 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 OPN4Q9UHM6 478 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 ZNF391Q9UJN7 358 aa7.42□□□□□ -1.22
LDB1-203ENST00000461873 CAB39Q9Y376 341 aaPredicted RBP7.42□□□□□ -1.22
LDB1-203ENST00000461873 AP4S1Q9Y587 144 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms