RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 COMMD3-BMI1R4GMX3 469 aa11.94□□□□□ -0.5
DNMT3A-207ENST00000461228 GGT3PA6NGU5 568 aa11.93□□□□□ -0.5
DNMT3A-207ENST00000461228 A6NLC8 198 aa11.93□□□□□ -0.5
DNMT3A-207ENST00000461228 ZNF878C9JN71 531 aa11.93□□□□□ -0.5
DNMT3A-207ENST00000461228 GYPAP02724 150 aa11.93□□□□□ -0.5
DNMT3A-207ENST00000461228 GABRA5P31644 462 aa11.93□□□□□ -0.5
DNMT3A-207ENST00000461228 SAA4P35542 130 aa11.93□□□□□ -0.5
DNMT3A-207ENST00000461228 IFNGR2P38484 337 aa11.93□□□□□ -0.5
DNMT3A-207ENST00000461228 GSK3BP49841 420 aa11.93□□□□□ -0.5
DNMT3A-207ENST00000461228 WDR38Q5JTN6 314 aa11.93□□□□□ -0.5
DNMT3A-207ENST00000461228 TEX30Q5JUR7 227 aa11.93□□□□□ -0.5
DNMT3A-207ENST00000461228 GLYATL3Q5SZD4 288 aa11.93□□□□□ -0.5
DNMT3A-207ENST00000461228 WDR82Q6UXN9 313 aa11.93□□□□□ -0.5
DNMT3A-207ENST00000461228 Q6ZPA2 131 aa11.93□□□□□ -0.5
DNMT3A-207ENST00000461228 OR10Z1Q8NGY1 313 aa11.93□□□□□ -0.5
DNMT3A-207ENST00000461228 OR2T4Q8NH00 348 aa11.93□□□□□ -0.5
DNMT3A-207ENST00000461228 TOR3AQ9H497 397 aa11.93□□□□□ -0.5
DNMT3A-207ENST00000461228 RGCCQ9H4X1 137 aa11.93□□□□□ -0.5
DNMT3A-207ENST00000461228 MAB21L2Q9Y586 359 aa11.93□□□□□ -0.5
DNMT3A-207ENST00000461228 COL7A1Q02388 2944 aa11.93□□□□□ -0.5
DNMT3A-207ENST00000461228 ZNF816-ZNF321PA0A0X1KG74 233 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 hCG_1807616A0A1W2PRN6 198 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 OR6C68A6NDL8 312 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 ANKRD30BLA7E2S9 258 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 GSTA4O15217 222 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 ALX3O95076 343 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 PAHP00439 452 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 SEMG1P04279 462 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 NAA10P41227 235 aaPredicted RBP11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 KIR2DS4P43632 304 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 GSSP48637 474 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 TGM4P49221 684 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 CAV3P56539 151 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 LRRC10Q5BKY1 277 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 OR4C13Q8NGP0 309 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 OR2AE1Q8NHA4 323 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 ITFG2Q969R8 447 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 FAM162AQ96A26 154 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 KCNJ15Q99712 375 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 SP140LQ9H930 580 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 DCAF13Q9NV06 445 aaKnown RBP11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 ONECUT1Q9UBC0 465 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 TENM3Q9P273 2699 aa11.92□□□□□ -0.5
DNMT3A-207ENST00000461228 TRBV23-1A0A0A0MS06 115 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 LOC100653049A0A140TA62 436 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 NKX6-3A6NJ46 265 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 TMEM210A6NLX4 147 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 XPNPEP2O43895 674 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 KRT34O76011 436 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 HLA-DQA2P01906 255 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 APOC1P02654 83 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 ZNF823P16415 610 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 CENPAP49450 140 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 BLVRAP53004 296 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 GRB2P62993 217 aaKnown RBP11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 HOXA4Q00056 320 aaPredicted RBP11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 SPIBQ01892 262 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 KRT72Q14CN4 511 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 HIST2H2BDQ6DRA6 164 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 CGB2Q6NT52 195 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 WDR86Q86TI4 376 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 NAA40Q86UY6 237 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 C1QL4Q86Z23 238 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 Q8N7P7 452 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 SDR9C7Q8NEX9 313 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 OR1M1Q8NGA1 313 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 OR52H1Q8NGJ2 320 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 OR8S1Q8NH09 359 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 OR4K13Q8NH42 304 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 FAM110DQ8TAY7 271 aaPredicted RBP11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 LRRC29Q8WV35 223 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 KCTD14Q9BQ13 255 aaPredicted RBP11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 COPS4Q9BT78 406 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 IFT27Q9BW83 186 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 NSRP1Q9H0G5 558 aaKnown RBP11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 FAM234AQ9H0X4 552 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 SRA1Q9HD15 236 aaKnown RBP11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 LRP12Q9Y561 859 aa11.91□□□□□ -0.5
DNMT3A-207ENST00000461228 hCG_38984A0A1B0GV85 526 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 G3V4G9 280 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 NDUFB3O43676 98 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 SLC15A1P46059 708 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 IL5RAQ01344 420 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 TSPAN31Q12999 210 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 CRIP3Q6Q6R5 217 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 ZNF788Q6ZQV5 615 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 ZNF826PQ6ZT77 177 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 C11orf53Q8IXP5 236 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 FAM216BQ8N7L0 139 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 CSNK2A3Q8NEV1 391 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 OR52L1Q8NGH7 329 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 OR5D13Q8NGL4 314 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 ITPKCQ96DU7 683 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 DDOQ99489 341 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 CDCA4Q9BXL8 241 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 CCDC134Q9H6E4 229 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 GORASP2Q9H8Y8 452 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 SPAG4Q9NPE6 437 aa11.9□□□□□ -0.5
DNMT3A-207ENST00000461228 SIRT7Q9NRC8 400 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms