RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 NMNAT2Q9BZQ4 307 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 MIXL1Q9H2W2 232 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 PCDHB16Q9NRJ7 776 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 KCNG2Q9UJ96 466 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 TIMM10BQ9Y5J6 103 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 SESN1Q9Y6P5 492 aa9.6□□□□□ -0.87
APTX-209ENST00000460940 CYSRT1A8MQ03 144 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 KRBOX1C9JBD0 128 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 SMLR1H3BR10 107 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 DCTN6O00399 190 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 IL1AP01583 271 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 SCG5P05408 212 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 PATE4P0C8F1 98 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 ZNF32P17041 273 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 GABRB1P18505 474 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 CDK5Q00535 292 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 BTN1A1Q13410 526 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 EXOSC2Q13868 293 aaKnown RBP9.59□□□□□ -0.87
APTX-209ENST00000460940 MYPOPQ86VE0 399 aaPredicted RBP9.59□□□□□ -0.87
APTX-209ENST00000460940 ZNF584Q8IVC4 421 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 CYB561A3Q8NBI2 242 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 SLC30A7Q8NEW0 376 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 NUP37Q8NFH4 326 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 PROKR2Q8NFJ6 384 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 SLC26A10Q8NG04 563 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 OR5T2Q8NGG2 359 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 OR1J2Q8NGS2 313 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 C11orf40Q8WZ69 217 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 UBE2FQ969M7 185 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 PIGTQ969N2 578 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 SLC25A46Q96AG3 418 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 MBD6Q96DN6 1003 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 OR2H1Q9GZK4 316 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 SRA1Q9HD15 236 aaKnown RBP9.59□□□□□ -0.87
APTX-209ENST00000460940 PPP1R14DQ9NXH3 145 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 CISD1Q9NZ45 108 aaKnown RBP9.59□□□□□ -0.87
APTX-209ENST00000460940 MGAT4AQ9UM21 535 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 MOKQ9UQ07 419 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 POLR1DQ9Y2S0 133 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 ATP23Q9Y6H3 246 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 PDZD2O15018 2839 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 RAI1Q7Z5J4 1906 aaPredicted RBP9.59□□□□□ -0.87
APTX-209ENST00000460940 CSMD1Q96PZ7 3565 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 SURF4O15260 269 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 FABP7O15540 132 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 PIPP12273 146 aaPredicted RBP9.59□□□□□ -0.87
APTX-209ENST00000460940 CALCRP30988 508 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 NUP62P37198 522 aaPredicted RBP9.59□□□□□ -0.87
APTX-209ENST00000460940 ST3GAL4Q11206 333 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 TBC1D28Q2M2D7 210 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 HSD17B12Q53GQ0 312 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 PYDC2Q56P42 97 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 PABPC1L2AQ5JQF8 200 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 DDI2Q5TDH0 399 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 TRIQKQ629K1 86 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 ACSM5Q6NUN0 579 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 B3GLCTQ6Y288 498 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 C19orf18Q8NEA5 215 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 OR10H5Q8NGA6 315 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 NRGNQ92686 78 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 UPRTQ96BW1 309 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 MS4A3Q96HJ5 214 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 CCL19Q99731 98 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 SOSTQ9BQB4 213 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 FN3KQ9H479 309 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 COPS3Q9UNS2 423 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 PLEKHA6Q9Y2H5 1048 aa9.59□□□□□ -0.87
APTX-209ENST00000460940 FAM240BA0A1B0GVZ2 78 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 MFSD2BA6NFX1 497 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 E7EQL1 145 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 LYRM1O43325 122 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 HSMCR30P0CW71 290 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 COX5BP10606 129 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 ZNF35P13682 527 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 SPI1P17947 270 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 APLNRP35414 380 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 RPS23P62266 143 aaKnown RBP9.58□□□□□ -0.88
APTX-209ENST00000460940 PSG4Q00888 419 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 DTX2Q86UW9 622 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 SMAP2Q8WU79 429 aaPredicted RBP9.58□□□□□ -0.88
APTX-209ENST00000460940 NEUROG1Q92886 237 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 SGK3Q96BR1 496 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 FOXN4Q96NZ1 517 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 REG4Q9BYZ8 158 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 GSX2Q9BZM3 304 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 WNT5BQ9H1J7 359 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 LIME1Q9H400 295 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 ZNF442Q9H7R0 627 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 CDH20Q9HBT6 801 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 ABCB9Q9NP78 766 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 BEX4Q9NWD9 120 aaPredicted RBP9.58□□□□□ -0.88
APTX-209ENST00000460940 ASH2LQ9UBL3 628 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 ADAM30Q9UKF2 790 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 MAB21L2Q9Y586 359 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 CACNG2Q9Y698 323 aa9.58□□□□□ -0.88
APTX-209ENST00000460940 C7orf66A4D0T2 115 aa9.57□□□□□ -0.88
APTX-209ENST00000460940 ZAR1LA6NP61 321 aa9.57□□□□□ -0.88
APTX-209ENST00000460940 PRR23D1E9PI22 279 aaPredicted RBP9.57□□□□□ -0.88
APTX-209ENST00000460940 INMT-MINDY4F8WBC2 141 aa9.57□□□□□ -0.88
APTX-209ENST00000460940 SGCEO43556 437 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms