RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 NPIPA2E9PIF3 369 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 VCYO14598 125 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 HSPA12AO43301 675 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 EMC8O43402 210 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 FADS1O60427 444 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 FCMRO60667 390 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 ICOSLGO75144 302 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 MED6O75586 246 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 REM1O75628 298 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 NDUFB4O95168 129 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 PRR23D2P0DMB1 279 aaPredicted RBP4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 UMPSP11172 480 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 PAX1P15863 534 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 CRHBPP24387 322 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 PMELP40967 661 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 TNFSF10P50591 281 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 SSR4P51571 173 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 NUDT6P53370 316 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 CEBPGP53567 150 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 MTPNP58546 118 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 RAB2AP61019 212 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 CXCR4P61073 352 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 BTG1P62324 171 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 ERVK-25P63136 954 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 SCN1BQ07699 218 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 FUT5Q11128 374 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 MAD2L1Q13257 205 aaPredicted RBP4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 FHL1Q13642 323 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 QPRTQ15274 297 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF239Q16600 458 aaKnown RBP4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 NRF1Q16656 503 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 MEP1AQ16819 746 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 PNLIPRP3Q17RR3 467 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF791Q3KP31 576 aaPredicted RBP4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 CST9LP1Q5W188 147 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 REP15Q6BDI9 236 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 DHRS7BQ6IAN0 325 aaPredicted RBP4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 MFSD12Q6NUT3 480 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 UQCC3Q6UW78 93 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 APOOLQ6UXV4 268 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 HACD2Q6Y1H2 254 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 CCDC190Q86UF4 302 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 TMEM17Q86X19 198 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 OR2L13Q8N349 312 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 TMEM156Q8N614 296 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 SLC5A8Q8N695 610 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 C10orf53Q8N6V4 93 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 BCORP1Q8N888 145 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 SCCPDHQ8NBX0 429 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 PAPD5Q8NDF8 572 aaKnown RBP4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 MDS2Q8NDY4 140 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 OR10A7Q8NGE5 316 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 OR5M1Q8NGP8 315 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 OR4K15Q8NH41 348 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 GPR151Q8TDV0 419 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 PAQR8Q8TEZ7 354 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 RORBQ92753 470 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 POP5Q969H6 163 aaKnown RBP4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 MAL2Q969L2 176 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 TMEM203Q969S6 136 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 S100PBPQ96BU1 408 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF524Q96C55 264 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 ZBED6CLQ96FA7 236 aaPredicted RBP4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 SCMH1Q96GD3 660 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 NARS2Q96I59 477 aaKnown RBP4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 C14orf144Q96I85 54 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF354BQ96LW1 612 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 LINC00052Q96N35 136 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 CCDC115Q96NT0 180 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF385AQ96PM9 386 aaKnown RBP4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 OR7D2Q96RA2 312 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 PANX1Q96RD7 426 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 SIGLEC11Q96RL6 698 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 RBM4BQ9BQ04 359 aaKnown RBP4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 UTP23Q9BRU9 249 aaKnown RBP4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 SLC35A5Q9BS91 424 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 NAA11Q9BSU3 229 aaPredicted RBP4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 KATNB1Q9BVA0 655 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 RBM4Q9BWF3 364 aaKnown RBP4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 NKX6-2Q9C056 277 aaPredicted RBP4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 OR51I1Q9H343 314 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 RIMS4Q9H426 269 aaPredicted RBP4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 TREM1Q9NP99 234 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 ASF1BQ9NVP2 202 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 USE1Q9NZ43 259 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 COQ3Q9NZJ6 369 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 SLC9A8Q9Y2E8 581 aa4.22□□□□□ -1.73
ATPAF1-203ENST00000460928 MED13LQ71F56 2210 aa4.21□□□□□ -1.74
ATPAF1-203ENST00000460928 CIB4A0PJX0 185 aa4.21□□□□□ -1.74
ATPAF1-203ENST00000460928 C5orf52A6NGY3 159 aa4.21□□□□□ -1.74
ATPAF1-203ENST00000460928 TSTD3H0UI37 97 aa4.21□□□□□ -1.74
ATPAF1-203ENST00000460928 BLOC1S5-TXNDC5H3BN57 136 aa4.21□□□□□ -1.74
ATPAF1-203ENST00000460928 TEX46H3BTG2 121 aa4.21□□□□□ -1.74
ATPAF1-203ENST00000460928 FXYD1O00168 92 aa4.21□□□□□ -1.74
ATPAF1-203ENST00000460928 HMGN4O00479 90 aa4.21□□□□□ -1.74
ATPAF1-203ENST00000460928 DLGAP1O14490 977 aa4.21□□□□□ -1.74
ATPAF1-203ENST00000460928 RFXANKO14593 260 aa4.21□□□□□ -1.74
ATPAF1-203ENST00000460928 MYL12BO14950 172 aa4.21□□□□□ -1.74
ATPAF1-203ENST00000460928 ORC5O43913 435 aa4.21□□□□□ -1.74
ATPAF1-203ENST00000460928 SMPD2O60906 423 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms