RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ZNF160Q9HCG1 818 aa13.73□□□□□ -0.21
LMNB1-203ENST00000460265 OR6C76A6NM76 312 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 GSTZ1O43708 216 aaPredicted RBP13.72□□□□□ -0.21
LMNB1-203ENST00000460265 AGTR1P30556 359 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 AKR1C3P42330 323 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 ISXQ2M1V0 245 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 ELFN2Q5R3F8 820 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 STPG1Q5TH74 334 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 LIN54Q6MZP7 749 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.72□□□□□ -0.21
LMNB1-203ENST00000460265 OR1J4Q8NGS1 313 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 AKR7LQ8NHP1 331 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 STOML3Q8TAV4 291 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 ARL11Q969Q4 196 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 CMBLQ96DG6 245 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 LURAP1Q96LR2 239 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 SLC6A7Q99884 636 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 VRK1Q99986 396 aaPredicted RBP13.72□□□□□ -0.21
LMNB1-203ENST00000460265 PCED1AQ9H1Q7 454 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 NSG1A0A0A6YYJ2 146 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 IGHG1P01857 330 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 PRSS12P56730 875 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 CLDN6P56747 220 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 RPS18P62269 152 aaKnown RBP13.72□□□□□ -0.21
LMNB1-203ENST00000460265 CLINT1Q14677 625 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 SLC22A6Q4U2R8 563 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 KRBOX4Q5JUW0 171 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 UNQ6126/PRO20091Q6UXV3 157 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 KCTD9Q7L273 389 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 MISPQ8IVT2 679 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 MUC20Q8N307 709 aaPredicted RBP13.72□□□□□ -0.21
LMNB1-203ENST00000460265 RAB33BQ9H082 229 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 BARX1Q9HBU1 254 aaPredicted RBP13.72□□□□□ -0.21
LMNB1-203ENST00000460265 NOP16Q9Y3C1 178 aaKnown RBP13.72□□□□□ -0.21
LMNB1-203ENST00000460265 IGKV1D-43A0A0B4J1Z2 117 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 ARGFXA6NJG6 315 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 QDPRP09417 244 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 VSIG10L2P0DP72 767 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 CALCBP10092 127 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 TMEM244Q5VVB8 128 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 C3orf33Q6P1S2 294 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 C17orf82Q86X59 251 aaPredicted RBP13.72□□□□□ -0.21
LMNB1-203ENST00000460265 ZNF584Q8IVC4 421 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 DEFB123Q8N688 67 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 MEGF10Q96KG7 1140 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 GFI1Q99684 422 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 SELENOIQ9C0D9 397 aa13.72□□□□□ -0.21
LMNB1-203ENST00000460265 ANKUB1A6NFN9 424 aa13.71□□□□□ -0.21
LMNB1-203ENST00000460265 GGT3PA6NGU5 568 aa13.71□□□□□ -0.21
LMNB1-203ENST00000460265 UBE2CO00762 179 aa13.71□□□□□ -0.21
LMNB1-203ENST00000460265 EIF2S3P41091 472 aaKnown RBP13.71□□□□□ -0.21
LMNB1-203ENST00000460265 OR4S1Q8NGB4 309 aa13.71□□□□□ -0.21
LMNB1-203ENST00000460265 OR4C16Q8NGL9 310 aa13.71□□□□□ -0.21
LMNB1-203ENST00000460265 RNASE11Q8TAA1 199 aaKnown RBP13.71□□□□□ -0.21
LMNB1-203ENST00000460265 RNF128Q8TEB7 428 aa13.71□□□□□ -0.21
LMNB1-203ENST00000460265 CA5BP1Q8WTZ4 195 aa13.71□□□□□ -0.21
LMNB1-203ENST00000460265 C15orf40Q8WUR7 153 aa13.71□□□□□ -0.21
LMNB1-203ENST00000460265 ST8SIA1Q92185 356 aa13.71□□□□□ -0.21
LMNB1-203ENST00000460265 PGAM5Q96HS1 289 aa13.71□□□□□ -0.21
LMNB1-203ENST00000460265 LOC100289279A0A1B0GTE1 492 aa13.71□□□□□ -0.22
LMNB1-203ENST00000460265 RFPL4AA6NLU0 287 aa13.71□□□□□ -0.22
LMNB1-203ENST00000460265 RFPL4AL1F8VTS6 287 aa13.71□□□□□ -0.22
LMNB1-203ENST00000460265 RER1O15258 196 aa13.71□□□□□ -0.22
LMNB1-203ENST00000460265 NDUFB6O95139 128 aa13.71□□□□□ -0.22
LMNB1-203ENST00000460265 IFI6P09912 130 aa13.71□□□□□ -0.22
LMNB1-203ENST00000460265 SRYQ05066 204 aa13.71□□□□□ -0.22
LMNB1-203ENST00000460265 GTF3AQ92664 365 aaKnown RBP13.71□□□□□ -0.22
LMNB1-203ENST00000460265 RASL10BQ96S79 203 aa13.71□□□□□ -0.22
LMNB1-203ENST00000460265 WDR13Q9H1Z4 485 aa13.71□□□□□ -0.22
LMNB1-203ENST00000460265 STMND1H3BQB6 276 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 CLN5O75503 358 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 CCNOP22674 350 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 CXADRP78310 365 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 SRSF3P84103 164 aaKnown RBP13.7□□□□□ -0.22
LMNB1-203ENST00000460265 TMEM200AQ86VY9 491 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 ZNF561Q8N587 486 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 DMBX1Q8NFW5 382 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 OR14L1PQ8NHC6 308 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 HAVCR2Q8TDQ0 301 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 SLC39A7Q92504 469 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 TGIF2Q9GZN2 237 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 BANF2Q9H503 90 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 SMCO4Q9NRQ5 59 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 SLC5A6Q9Y289 635 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 DMRT1Q9Y5R6 373 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 A0A1W2PQD3 144 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 MS4A18H0YCH9 400 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 ABOP16442 354 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 MS4A18Q3C1V0 323 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 TCEAL6Q6IPX3 200 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 YRDCQ86U90 279 aaKnown RBP13.7□□□□□ -0.22
LMNB1-203ENST00000460265 PISDQ9UG56 409 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 WIF1Q9Y5W5 379 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 ZNF407Q9C0G0 2248 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 ICE1Q9Y2F5 2266 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 A0A1W2PPE3 182 aa13.7□□□□□ -0.22
LMNB1-203ENST00000460265 ZNF736B4DX44 427 aaPredicted RBP13.7□□□□□ -0.22
LMNB1-203ENST00000460265 DXOO77932 396 aaKnown RBP13.7□□□□□ -0.22
LMNB1-203ENST00000460265 JMJD7P0C870 316 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms