RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 SLC25A26Q70HW3 274 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 FBLIM1Q8WUP2 373 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 ROBO4Q8WZ75 1007 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 RDH5Q92781 318 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 ALKBH3Q96Q83 286 aaPredicted RBP13.24□□□□□ -0.29
PTPRU-205ENST00000460170 NKX6-2Q9C056 277 aaPredicted RBP13.24□□□□□ -0.29
PTPRU-205ENST00000460170 DLL4Q9NR61 685 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 ST3GAL6Q9Y274 331 aa13.24□□□□□ -0.29
PTPRU-205ENST00000460170 MPPED1O15442 326 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 HNF4GQ14541 408 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 OR2V1Q8NHB1 315 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 GPX8Q8TED1 209 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 PLEKHA2Q9HB19 425 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 FBXO4Q9UKT5 387 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 KPTNQ9Y664 436 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 HRKO00198 91 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 EFSO43281 561 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 AVPR2P30518 371 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 CST9LP1Q5W188 147 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 POLDIP2Q9Y2S7 368 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 IGKV1-8A0A0C4DH67 115 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 SPINT2O43291 252 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 KITLGP21583 273 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 F2RL1P55085 397 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 UBE2IP63279 158 aaKnown RBP13.23□□□□□ -0.29
PTPRU-205ENST00000460170 FUT7Q11130 342 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 SRSF5Q13243 272 aaKnown RBP13.23□□□□□ -0.29
PTPRU-205ENST00000460170 CEACAM16Q2WEN9 425 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 TOR2AQ5JU69 321 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 FAM74A1Q5RGS3 127 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 PXDC1Q5TGL8 231 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 A0A1W2PQF6 199 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 GLAP06280 429 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 BAXQ07812 192 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 ZNF79Q15937 498 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 ISXQ2M1V0 245 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 AKR7LQ8NHP1 331 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 RTN4IP1Q8WWV3 396 aaPredicted RBP13.23□□□□□ -0.29
PTPRU-205ENST00000460170 DYNLRB1Q9NP97 96 aa13.23□□□□□ -0.29
PTPRU-205ENST00000460170 RER1O15258 196 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 PLA2G10O15496 165 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 BCL2L11O43521 198 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 SNCAP37840 140 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 ZXDCQ2QGD7 858 aaPredicted RBP13.22□□□□□ -0.29
PTPRU-205ENST00000460170 PWWP2BQ6NUJ5 590 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 SFT2D1Q8WV19 159 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 UBL7Q96S82 380 aaPredicted RBP13.22□□□□□ -0.29
PTPRU-205ENST00000460170 DEFB127Q9H1M4 99 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 WNT16Q9UBV4 365 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 E5RGE8 158 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 LRP3O75074 770 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 AANATQ16613 207 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 HIST2H3PS2Q5TEC6 136 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 TMEM91Q6ZNR0 172 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 ZDHHC22Q8N966 263 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 OR4A16Q8NH70 328 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 NSG2Q9Y328 171 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 SDHBP21912 280 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 CD80P33681 288 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 PIGPP57054 158 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 C1QL3Q5VWW1 255 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 TMEM268Q5VZI3 342 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 ZNF573Q86YE8 665 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 OSR2Q8N2R0 312 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 PRELID3BQ9Y3B1 194 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 TIMM8BQ9Y5J9 83 aaPredicted RBP13.22□□□□□ -0.29
PTPRU-205ENST00000460170 SCN10AQ9Y5Y9 1956 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 ANKRD20A5PA0PJZ0 165 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 C11orf87Q6NUJ2 197 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 FAM199XQ6PEV8 388 aaPredicted RBP13.22□□□□□ -0.29
PTPRU-205ENST00000460170 OR2W3Q7Z3T1 314 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 MUC20Q8N307 709 aaPredicted RBP13.22□□□□□ -0.29
PTPRU-205ENST00000460170 TMEM52Q8NDY8 209 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 ZC3HAV1LQ96H79 300 aaKnown RBP13.22□□□□□ -0.29
PTPRU-205ENST00000460170 GNRHR2Q96P88 292 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 SCN3AQ9NY46 2000 aa13.22□□□□□ -0.29
PTPRU-205ENST00000460170 ZNF816-ZNF321PA0A0X1KG74 233 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 C4orf47A7E2U8 309 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 LGALS8O00214 317 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 SHOXO15266 292 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 ZNF354AO60765 605 aaPredicted RBP13.21□□□□□ -0.29
PTPRU-205ENST00000460170 WNT11O96014 354 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 INHBBP09529 407 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 GALNSP34059 522 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 IL11RAQ14626 422 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 MESTQ5EB52 335 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 BRICD5Q6PL45 260 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 SPICQ8N5J4 248 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 OR4D9Q8NGE8 314 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 NXF2Q9GZY0 626 aaKnown RBP13.21□□□□□ -0.29
PTPRU-205ENST00000460170 CRLF2Q9HC73 371 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 ZNF275Q9NSD4 429 aaPredicted RBP13.21□□□□□ -0.29
PTPRU-205ENST00000460170 RAB19A4D1S5 217 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 ANGPTL7O43827 346 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 RFC3P40938 356 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 EDDM3BP56851 147 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 SPSB1Q96BD6 273 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 FOXB1Q99853 325 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 CTDSPLO15194 276 aa13.21□□□□□ -0.29
PTPRU-205ENST00000460170 H2AFB1P0C5Y9 115 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms