RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 NXPH1P58417 271 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 CLRN1P58418 232 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 HNRNPKP61978 463 aaKnown RBP eCLIP12.5□□□□□ -0.41
SCFD1-203ENST00000458591 SHEQ5VZ18 495 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 TMEM71Q6P5X7 295 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 HAGHLQ6PII5 290 aaPredicted RBP12.5□□□□□ -0.41
SCFD1-203ENST00000458591 FAM57BQ71RH2 274 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 HOGA1Q86XE5 327 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 PUSL1Q8N0Z8 303 aaKnown RBP12.5□□□□□ -0.41
SCFD1-203ENST00000458591 NFAM1Q8NET5 270 aaPredicted RBP12.5□□□□□ -0.41
SCFD1-203ENST00000458591 OR10G3Q8NGC4 313 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 ST6GALNAC5Q9BVH7 336 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 MRPL13Q9BYD1 178 aaKnown RBP12.5□□□□□ -0.41
SCFD1-203ENST00000458591 AKIRIN1Q9H9L7 192 aaPredicted RBP12.5□□□□□ -0.41
SCFD1-203ENST00000458591 IGKV1-9A0A0C4DH69 117 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 VSTM2BA6NLU5 285 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 GIMD1P0DJR0 217 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 APOBEC1P41238 236 aaKnown RBP12.5□□□□□ -0.41
SCFD1-203ENST00000458591 SMAD4Q13485 552 aaKnown RBP12.5□□□□□ -0.41
SCFD1-203ENST00000458591 ANKRD55Q3KP44 614 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 LCN10Q6JVE6 187 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 DEGS2Q6QHC5 323 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 OR4K17Q8NGC6 315 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 OR51F2Q8NH61 342 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 DDIT4LQ96D03 193 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 PIK3IP1Q96FE7 263 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 CHRNA10Q9GZZ6 450 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 RAB33BQ9H082 229 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 CYTL1Q9NRR1 136 aa12.5□□□□□ -0.41
SCFD1-203ENST00000458591 ASCC3Q8N3C0 2202 aaKnown RBP12.5□□□□□ -0.41
SCFD1-203ENST00000458591 FREM2Q5SZK8 3169 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 TMEM218A2RU14 115 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 DBX1A6NMT0 343 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 CDC14BO60729 498 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 CRTAPO75718 401 aaPredicted RBP12.49□□□□□ -0.41
SCFD1-203ENST00000458591 DUS4LO95620 317 aaKnown RBP12.49□□□□□ -0.41
SCFD1-203ENST00000458591 HCKP08631 526 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 GLRA1P23415 457 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 CTAG1AP78358 180 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 ZNF529Q6P280 563 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 CLEC18BQ6UXF7 455 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 PLXDC1Q8IUK5 500 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 CBLN2Q8IUK8 224 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 PLPP5Q8NEB5 264 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 ST8SIA1Q92185 356 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 RAB3CQ96E17 227 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 OR10C1Q96KK4 312 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 OR5B2Q96R09 309 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 OR2S2Q9NQN1 319 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 FBXO9Q9UK97 447 aaPredicted RBP12.49□□□□□ -0.41
SCFD1-203ENST00000458591 DUX1O43812 170 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 GDF9O60383 454 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 HEXBP07686 556 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 PTGDSP41222 190 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 DHPSP49366 369 aaPredicted RBP12.49□□□□□ -0.41
SCFD1-203ENST00000458591 PRSS12P56730 875 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 SUPT4H1P63272 117 aaKnown RBP12.49□□□□□ -0.41
SCFD1-203ENST00000458591 SGCAQ16586 387 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 FAHD2BQ6P2I3 314 aaPredicted RBP12.49□□□□□ -0.41
SCFD1-203ENST00000458591 ZNF574Q6ZN55 896 aaPredicted RBP12.49□□□□□ -0.41
SCFD1-203ENST00000458591 RAB11FIP2Q7L804 512 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 LDLRAD3Q86YD5 345 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 FOXRED2Q8IWF2 684 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 SPAG16Q8N0X2 631 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 FAHD2AQ96GK7 314 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 PPP4R1LQ9P1A2 415 aa12.49□□□□□ -0.41
SCFD1-203ENST00000458591 OR2J2O76002 312 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 H2AFB1P0C5Y9 115 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 PGA4P0DJD7 388 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 PGA3P0DJD8 388 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 MPZP25189 248 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 P2RY4P51582 365 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 SCRN3Q0VDG4 424 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 RAB30Q15771 203 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 DRAM2Q6UX65 266 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 GTPBP8Q8N3Z3 284 aaPredicted RBP12.48□□□□□ -0.41
SCFD1-203ENST00000458591 OR13G1Q8NGZ3 307 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 TERB2Q8NHR7 220 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 GPER1Q99527 375 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 RTBDNQ9BSG5 229 aaPredicted RBP12.48□□□□□ -0.41
SCFD1-203ENST00000458591 ALKBH4Q9NXW9 302 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 KLHL13Q9P2N7 655 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 GPR132Q9UNW8 380 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 FAM96BQ9Y3D0 163 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 NUDT19A8MXV4 375 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 ZNF205O95201 554 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 TPT1P13693 172 aaKnown RBP12.48□□□□□ -0.41
SCFD1-203ENST00000458591 GLULP15104 373 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 HIST1H1DP16402 221 aaKnown RBP12.48□□□□□ -0.41
SCFD1-203ENST00000458591 PVALBP20472 110 aaPredicted RBP12.48□□□□□ -0.41
SCFD1-203ENST00000458591 PLPPR5Q32ZL2 321 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 PRAMEF20Q5VT98 475 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 CRIP3Q6Q6R5 217 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 PGAP1Q75T13 922 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 UEVLDQ8IX04 471 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 PNLDC1Q8NA58 520 aaKnown RBP12.48□□□□□ -0.41
SCFD1-203ENST00000458591 OR4A4PQ8NGN8 299 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 OR2AJ1Q8NGZ0 328 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 ARL11Q969Q4 196 aa12.48□□□□□ -0.41
SCFD1-203ENST00000458591 WDR77Q9BQA1 342 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms