RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 F5H5K5 113 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 M0R233 179 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 GOSR2O14653 212 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 NOS1APO75052 506 aaPredicted RBP14.65□□□□□ -0.06
CCDC43-202ENST00000457422 DHRS3O75911 302 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 SIX6O95475 246 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 GSTP1P09211 210 aaKnown RBP14.65□□□□□ -0.06
CCDC43-202ENST00000457422 GNB3P16520 340 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 CXCL2P19875 107 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 ALDH3B1P43353 468 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 EXOSC2Q13868 293 aaKnown RBP14.65□□□□□ -0.06
CCDC43-202ENST00000457422 ZNF775Q96BV0 537 aaPredicted RBP14.65□□□□□ -0.06
CCDC43-202ENST00000457422 C10orf35Q96D05 121 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 NICN1Q9BSH3 213 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 SELENOIQ9C0D9 397 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 P4HTMQ9NXG6 502 aa14.65□□□□□ -0.06
CCDC43-202ENST00000457422 OR6C65A6NJZ3 312 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 ZNF716A6NP11 495 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 M0R296 226 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 SSX5O60225 188 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 CSN2P05814 226 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 ZNF35P13682 527 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 NFYAP23511 347 aaPredicted RBP14.64□□□□□ -0.07
CCDC43-202ENST00000457422 HOXD11P31277 338 aaPredicted RBP14.64□□□□□ -0.07
CCDC43-202ENST00000457422 SLC6A9P48067 706 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 CARD18P57730 90 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 OPCMLQ14982 345 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 ABLIM2Q6H8Q1 611 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 C12orf45Q8N5I9 185 aaPredicted RBP14.64□□□□□ -0.07
CCDC43-202ENST00000457422 GVQW1Q8N7I0 195 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 TMEM104Q8NE00 496 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 PP6455Q8WZ26 134 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 ZNF837Q96EG3 531 aaPredicted RBP14.64□□□□□ -0.07
CCDC43-202ENST00000457422 ELMOD3Q96FG2 381 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 TMEM59Q9BXS4 323 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 DEPPQ9NTK1 212 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 GHRLQ9UBU3 117 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 PLEKHA6Q9Y2H5 1048 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 AUP1Q9Y679 476 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 DOCK10Q96BY6 2186 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 MCRIP1C9JLW8 97 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 M0R135 149 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 MPIG6BO95866 241 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 JMJD7P0C870 316 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 CYB561P49447 251 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 SCGB2B2Q4G0G5 96 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 SLC22A6Q4U2R8 563 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 TMED4Q7Z7H5 227 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 GPR137CQ8N3F9 429 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 ZDHHC22Q8N966 263 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 PSMF1Q92530 271 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 FBXO17Q96EF6 278 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 ZNF799Q96GE5 643 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 LIN37Q96GY3 246 aaPredicted RBP14.64□□□□□ -0.07
CCDC43-202ENST00000457422 SFXN2Q96NB2 322 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 IFT46Q9NQC8 304 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 ZNF224Q9NZL3 707 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 UBQLN2Q9UHD9 624 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 KCNK7Q9Y2U2 307 aa14.64□□□□□ -0.07
CCDC43-202ENST00000457422 CNTRLQ7Z7A1 2325 aa14.63□□□□□ -0.07
CCDC43-202ENST00000457422 C9orf172C9J069 976 aa14.63□□□□□ -0.07
CCDC43-202ENST00000457422 L7N2F9 121 aa14.63□□□□□ -0.07
CCDC43-202ENST00000457422 F10P00742 488 aa14.63□□□□□ -0.07
CCDC43-202ENST00000457422 SEC61A1P61619 476 aaKnown RBP14.63□□□□□ -0.07
CCDC43-202ENST00000457422 NKPD1Q17RQ9 610 aa14.63□□□□□ -0.07
CCDC43-202ENST00000457422 CLVS2Q5SYC1 327 aa14.63□□□□□ -0.07
CCDC43-202ENST00000457422 DCAF12L2Q5VW00 463 aa14.63□□□□□ -0.07
CCDC43-202ENST00000457422 CRIP3Q6Q6R5 217 aa14.63□□□□□ -0.07
CCDC43-202ENST00000457422 OR8H3Q8N146 312 aa14.63□□□□□ -0.07
CCDC43-202ENST00000457422 PNLDC1Q8NA58 520 aaKnown RBP14.63□□□□□ -0.07
CCDC43-202ENST00000457422 SPTSSAQ969W0 71 aa14.63□□□□□ -0.07
CCDC43-202ENST00000457422 GPER1Q99527 375 aa14.63□□□□□ -0.07
CCDC43-202ENST00000457422 CHST5Q9GZS9 411 aa14.63□□□□□ -0.07
CCDC43-202ENST00000457422 PLEK2Q9NYT0 353 aa14.63□□□□□ -0.07
CCDC43-202ENST00000457422 VSIG4Q9Y279 399 aa14.63□□□□□ -0.07
CCDC43-202ENST00000457422 RPS10-NUDT3A0A1W2PQS6 291 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 PINLYPA6NC86 204 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 TRAPPC6AO75865 159 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 CST2P09228 141 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 NAT2P11245 290 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 HIST1H1DP16402 221 aaKnown RBP14.62□□□□□ -0.07
CCDC43-202ENST00000457422 NAT1P18440 290 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 OR3A3P47888 321 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 STARP49675 285 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 CXADRP78310 365 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 OC90Q02509 493 aaPredicted RBP14.62□□□□□ -0.07
CCDC43-202ENST00000457422 DHRS2Q13268 280 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 RAB35Q15286 201 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 PNLIPRP3Q17RR3 467 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 PLAC9Q5JTB6 97 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 CLLU1Q5K131 121 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 WIPI1Q5MNZ9 446 aaPredicted RBP14.62□□□□□ -0.07
CCDC43-202ENST00000457422 CD163Q86VB7 1156 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 SLC25A42Q86VD7 318 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 DTX1Q86Y01 620 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 NAXDQ8IW45 347 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 OR56B1Q8NGI3 324 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 OR2V1Q8NHB1 315 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 MRGPRFQ96AM1 343 aa14.62□□□□□ -0.07
CCDC43-202ENST00000457422 RAB3CQ96E17 227 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms