RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 MRPS34P82930 218 aaKnown RBP10.33□□□□□ -0.76
VTA1-203ENST00000452973 C4orf46Q504U0 113 aa10.33□□□□□ -0.76
VTA1-203ENST00000452973 PGAP1Q75T13 922 aa10.33□□□□□ -0.76
VTA1-203ENST00000452973 FGFBP3Q8TAT2 258 aa10.33□□□□□ -0.76
VTA1-203ENST00000452973 SPTSSAQ969W0 71 aa10.33□□□□□ -0.76
VTA1-203ENST00000452973 TTTY12Q9BZ98 90 aa10.33□□□□□ -0.76
VTA1-203ENST00000452973 ZNF703Q9H7S9 590 aaPredicted RBP10.33□□□□□ -0.76
VTA1-203ENST00000452973 CALHM2Q9HA72 323 aa10.33□□□□□ -0.76
VTA1-203ENST00000452973 ARPC4-TTLL3A0A0A6YYG9 625 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 A0A1B0GUH1 482 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 DNASE1P24855 282 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 TAS2R19P59542 299 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 SLC16A14Q7RTX9 510 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 VASH2Q86V25 355 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 CPNE4Q96A23 557 aaPredicted RBP10.32□□□□□ -0.76
VTA1-203ENST00000452973 INTS12Q96CB8 462 aaKnown RBP10.32□□□□□ -0.76
VTA1-203ENST00000452973 FOXB1Q99853 325 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 UQCC2Q9BRT2 126 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 ZNF436Q9C0F3 470 aaPredicted RBP10.32□□□□□ -0.76
VTA1-203ENST00000452973 TMEM38BQ9NVV0 291 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 EIF3KQ9UBQ5 218 aaKnown RBP10.32□□□□□ -0.76
VTA1-203ENST00000452973 NOSIPQ9Y314 301 aaKnown RBP10.32□□□□□ -0.76
VTA1-203ENST00000452973 KIAA1549Q9HCM3 1950 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 A0A096LPE4 126 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 A0A1W2PPZ6 126 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 RGS13O14921 159 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 SOCS1O15524 211 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 PRAF2O60831 178 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 BPNT1O95861 308 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 TGM6O95932 706 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 CCNOP22674 350 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 HTR5AP47898 357 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 AIMP2Q13155 320 aaKnown RBP10.32□□□□□ -0.76
VTA1-203ENST00000452973 TNK1Q13470 666 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 UBE2V2Q15819 145 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 C17orf107Q6ZR85 190 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 TMPRSS7Q7RTY8 843 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 C1QL2Q7Z5L3 287 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 FNDC9Q8TBE3 224 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 ADAMTS17Q8TE56 1095 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 GPN1Q9HCN4 374 aaPredicted RBP10.32□□□□□ -0.76
VTA1-203ENST00000452973 DLL4Q9NR61 685 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 MEIKINA0A087WXM9 373 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 TERTO14746 1132 aaKnown RBP10.32□□□□□ -0.76
VTA1-203ENST00000452973 MRPL33O75394 65 aaKnown RBP10.32□□□□□ -0.76
VTA1-203ENST00000452973 CD37P11049 281 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 FCGR2AP12318 317 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 SRSF6Q13247 344 aaKnown RBP10.32□□□□□ -0.76
VTA1-203ENST00000452973 KISS1Q15726 138 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 TSPO2Q5TGU0 170 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 JMJD6Q6NYC1 403 aaPredicted RBP10.32□□□□□ -0.76
VTA1-203ENST00000452973 NLRC3Q7RTR2 1065 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 BPIFB2Q8N4F0 458 aa10.32□□□□□ -0.76
VTA1-203ENST00000452973 DNPH1O43598 174 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 DHRS3O75911 302 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 SERPINA2P20848 420 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 QRFPP83859 136 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 HGFACQ04756 655 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 ZNF260Q3ZCT1 412 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 RAB12Q6IQ22 244 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 ZNF529Q6P280 563 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 TUSC5Q8IXB3 177 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 TMEM251Q8N6I4 163 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 TNFAIP8L1Q8WVP5 186 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 TMEM59Q9BXS4 323 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 DEFB127Q9H1M4 99 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 RANBP3Q9H6Z4 567 aaPredicted RBP10.31□□□□□ -0.76
VTA1-203ENST00000452973 PARD6AQ9NPB6 346 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 IFT46Q9NQC8 304 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 GPR173Q9NS66 373 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 SPTBN2O15020 2390 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 ZNF780AO75290 641 aaPredicted RBP10.31□□□□□ -0.76
VTA1-203ENST00000452973 TPPPO94811 219 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 RAB6AP20340 208 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 CSRP2Q16527 193 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 PDSS1Q5T2R2 415 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 C6orf183Q5T699 404 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 C9orf62Q8N4C0 152 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 OR10R2Q8NGX6 335 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 SGK3Q96BR1 496 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 S100A13Q99584 98 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 SLC6A7Q99884 636 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 POFUT1Q9H488 388 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 GPR35Q9HC97 309 aa10.31□□□□□ -0.76
VTA1-203ENST00000452973 ZFHX4Q86UP3 3567 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 UBE2QL1A1L167 161 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 LHX2P50458 406 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 CXADRP78310 365 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 PSG4Q00888 419 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 ABLIM2Q6H8Q1 611 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 C11orf88Q6PI97 169 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.3□□□□□ -0.76
VTA1-203ENST00000452973 SKA3Q8IX90 412 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 PNLDC1Q8NA58 520 aaKnown RBP10.3□□□□□ -0.76
VTA1-203ENST00000452973 OR1F12Q8NHA8 337 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 CPT1CQ8TCG5 803 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 LPAR5Q9H1C0 372 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 OR10A2Q9H208 303 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 SLA2Q9H6Q3 261 aa10.3□□□□□ -0.76
VTA1-203ENST00000452973 A0A0A6YYD4 124 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms