RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 PURGQ9UJV8 347 aaKnown RBP9.91□□□□□ -0.82
SCN9A-204ENST00000452182 FZR1Q9UM11 496 aa9.91□□□□□ -0.82
SCN9A-204ENST00000452182 SIRT4Q9Y6E7 314 aaPredicted RBP9.91□□□□□ -0.82
SCN9A-204ENST00000452182 ROS1P08922 2347 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 A0A1B0GWJ7 208 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 CD300LBA8K4G0 201 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 P2RY10O00398 339 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 DHRS3O75911 302 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 CD8AP01732 235 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 BMP4P12644 408 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 PRF1P14222 555 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 ZNF12P17014 697 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 CD53P19397 219 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 CELP19835 753 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 ACHEP22303 614 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 MMP15P51511 669 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 TNK1Q13470 666 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 GFOD2Q3B7J2 385 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 ZBTB37Q5TC79 503 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 C11orf71Q6IPW1 123 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 FTMTQ8N4E7 242 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 ZNF676Q8N7Q3 588 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 CSNK2A3Q8NEV1 391 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 PGLYRP3Q96LB9 341 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 PDCD1LG2Q9BQ51 273 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 SYT3Q9BQG1 590 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 TRAF4Q9BUZ4 470 aaPredicted RBP9.9□□□□□ -0.82
SCN9A-204ENST00000452182 CYSLTR2Q9NS75 346 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 HHLA2Q9UM44 414 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 V9GYS6 101 aa9.9□□□□□ -0.82
SCN9A-204ENST00000452182 A0A1B0GVI7 797 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 LOC107986453A0A1B0GWG9 222 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 A0A1W2PPW3 197 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 MAGEA13PA6NCF6 341 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 GGT3PA6NGU5 568 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 SYT7O43581 403 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 SOD3P08294 240 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 CPEP16870 476 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 MAP2K3P46734 347 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 SNRPD2P62316 118 aaKnown RBP9.89□□□□□ -0.83
SCN9A-204ENST00000452182 YIF1BQ5BJH7 314 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 ZMAT1Q5H9K5 638 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 OR2T2Q6IF00 324 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 KCTD8Q6ZWB6 473 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 COMMD2Q86X83 199 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 RDH10Q8IZV5 341 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 OR8G5Q8NG78 346 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 OR14K1Q8NGZ2 314 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 GHSRQ92847 366 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 UFD1Q92890 307 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 C10orf35Q96D05 121 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 OPALINQ96PE5 141 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 SOX7Q9BT81 388 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 PLA2G2EQ9NZK7 142 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 MRPL15Q9P015 296 aaKnown RBP9.89□□□□□ -0.83
SCN9A-204ENST00000452182 TAAR3PQ9P1P4 343 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 MYEF2Q9P2K5 600 aaKnown RBP9.89□□□□□ -0.83
SCN9A-204ENST00000452182 ZNF281Q9Y2X9 895 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 CENPEQ02224 2701 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 TACC2O95359 2948 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 PLSCR5A0PG75 271 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 M0R233 179 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 TIMM8AO60220 97 aaPredicted RBP9.89□□□□□ -0.83
SCN9A-204ENST00000452182 ADH4P08319 380 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 HSMCR30P0CW71 290 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 ACKR3P25106 362 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 PPOXP50336 477 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 RIPPLY1Q0D2K3 151 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 NKPD1Q17RQ9 610 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 ODF4Q2M2E3 257 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 ALKBH6Q3KRA9 238 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 SYT6Q5T7P8 510 aaPredicted RBP9.89□□□□□ -0.83
SCN9A-204ENST00000452182 MS4A15Q8N5U1 240 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 ZFP41Q8N8Y5 198 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 SEMA6DQ8NFY4 1073 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 OR56B2PQ8NGI1 322 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 GPR148Q8TDV2 347 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 FAM71F1Q96KD3 344 aaPredicted RBP9.89□□□□□ -0.83
SCN9A-204ENST00000452182 SLC30A2Q9BRI3 323 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 SLC22A4Q9H015 551 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 MS4A5Q9H3V2 200 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 VCX3AQ9NNX9 186 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 EDARQ9UNE0 448 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 LAMP3Q9UQV4 416 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 DSCAMO60469 2012 aa9.89□□□□□ -0.83
SCN9A-204ENST00000452182 ZNF816-ZNF321PA0A0X1KG74 233 aa9.88□□□□□ -0.83
SCN9A-204ENST00000452182 OVOL3O00110 214 aa9.88□□□□□ -0.83
SCN9A-204ENST00000452182 CST4P01036 141 aa9.88□□□□□ -0.83
SCN9A-204ENST00000452182 SMIM18P0DKX4 95 aa9.88□□□□□ -0.83
SCN9A-204ENST00000452182 JUNBP17275 347 aaPredicted RBP9.88□□□□□ -0.83
SCN9A-204ENST00000452182 KRTAP10-9P60411 292 aa9.88□□□□□ -0.83
SCN9A-204ENST00000452182 RPS11P62280 158 aaKnown RBP eCLIP9.88□□□□□ -0.83
SCN9A-204ENST00000452182 SLC3A1Q07837 685 aa9.88□□□□□ -0.83
SCN9A-204ENST00000452182 ARMCX4Q5H9R4 360 aa9.88□□□□□ -0.83
SCN9A-204ENST00000452182 LIPKQ5VXJ0 399 aa9.88□□□□□ -0.83
SCN9A-204ENST00000452182 PAMR1Q6UXH9 720 aa9.88□□□□□ -0.83
SCN9A-204ENST00000452182 PHC2Q8IXK0 858 aa9.88□□□□□ -0.83
SCN9A-204ENST00000452182 OR13G1Q8NGZ3 307 aa9.88□□□□□ -0.83
SCN9A-204ENST00000452182 RGP1Q92546 391 aaPredicted RBP9.88□□□□□ -0.83
SCN9A-204ENST00000452182 MUL1Q969V5 352 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms