RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 RPUSD1Q9UJJ7 312 aaKnown RBP8.99□□□□□ -0.97
USP1-204ENST00000452143 CAB39Q9Y376 341 aaPredicted RBP8.99□□□□□ -0.97
USP1-204ENST00000452143 CDH10Q9Y6N8 788 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 V9GYQ6 96 aa8.99□□□□□ -0.97
USP1-204ENST00000452143 SLC22A31A6NKX4 558 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 ANKRD30BLA7E2S9 258 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 ZNF878C9JN71 531 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 GRPP07492 148 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 FBP1P09467 338 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 PRDX6P30041 224 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 RRM2P31350 389 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 RPS27P42677 84 aaKnown RBP8.98□□□□□ -0.97
USP1-204ENST00000452143 ENTPD1P49961 510 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 ARF6P62330 175 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 TAF9Q16594 264 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 PCK2Q16822 640 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 MICBQ29980 383 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 SLC35F1Q5T1Q4 408 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 ASPHD2Q6ICH7 369 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 PGBD2Q6P3X8 592 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 ZNF826PQ6ZT77 177 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 VMO1Q7Z5L0 202 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 CMTM4Q8IZR5 234 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 LINC00471Q8N535 108 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 ZSCAN4Q8NAM6 433 aaPredicted RBP8.98□□□□□ -0.97
USP1-204ENST00000452143 OR8S1Q8NH09 359 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 GNPDA2Q8TDQ7 276 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 ST8SIA4Q92187 359 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 SLAMF6Q96DU3 332 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 DDOQ99489 341 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 CNTD2Q9H8S5 307 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 ADA2Q9NZK5 511 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 ZNRD1Q9P1U0 126 aa8.98□□□□□ -0.97
USP1-204ENST00000452143 TET2Q6N021 2002 aaPredicted RBP8.97□□□□□ -0.97
USP1-204ENST00000452143 BTBD17A6NE02 478 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 TVP23AA6NH52 213 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 FCN3O75636 299 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 KRT36O76013 467 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 APOC1P02654 83 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 SPARCP09486 303 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 HSD17B1P14061 328 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 ANOS1P23352 680 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 CFL1P23528 166 aaKnown RBP8.97□□□□□ -0.97
USP1-204ENST00000452143 FMO3P31513 532 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 PYCR1P32322 319 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 SLC15A1P46059 708 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 BLVRAP53004 296 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 KRTAP10-3P60369 221 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 GRB2P62993 217 aaKnown RBP8.97□□□□□ -0.97
USP1-204ENST00000452143 GUCA2AQ02747 115 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 TAF13Q15543 124 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 SNCBQ16143 134 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 TEX30Q5JUR7 227 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 SLC36A1Q7Z2H8 476 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 LNX2Q8N448 690 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 FTMTQ8N4E7 242 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 RNF148Q8N7C7 305 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 CYB561A3Q8NBI2 242 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 LY6G5BQ8NDX9 201 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 NSMCE2Q96MF7 247 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 MYLK2Q9H1R3 596 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 TOR3AQ9H497 397 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 C16orf95Q9H693 158 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 EGLN3Q9H6Z9 239 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 SP140LQ9H930 580 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 TCF7L1Q9HCS4 588 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 IL1RAPQ9NPH3 570 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 IL20Q9NYY1 176 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 VPREB3Q9UKI3 123 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 PRPF19Q9UMS4 504 aaKnown RBP8.97□□□□□ -0.97
USP1-204ENST00000452143 FAM96BQ9Y3D0 163 aa8.97□□□□□ -0.97
USP1-204ENST00000452143 C5orf63A6NC05 138 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 ARPC2O15144 300 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 SLC2A1P11166 492 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 PSKH1P11801 424 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 SNRPBP14678 240 aaKnown RBP8.96□□□□□ -0.98
USP1-204ENST00000452143 HSD11B1P28845 292 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 NAA10P41227 235 aaPredicted RBP8.96□□□□□ -0.98
USP1-204ENST00000452143 PRKXP51817 358 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 C2orf68Q2NKX9 166 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 WDR38Q5JTN6 314 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 SAMD4BQ5PRF9 694 aaKnown RBP8.96□□□□□ -0.98
USP1-204ENST00000452143 DHRS7BQ6IAN0 325 aaPredicted RBP8.96□□□□□ -0.98
USP1-204ENST00000452143 LYPD4Q6UWN0 246 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 WDR82Q6UXN9 313 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 Q6ZSV7 163 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 RASSF6Q6ZTQ3 369 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 SLC16A9Q7RTY1 509 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 DPY19L4Q7Z388 723 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 WDR86Q86TI4 376 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 SLC37A3Q8NCC5 494 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 OR1M1Q8NGA1 313 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 OR52H1Q8NGJ2 320 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 OR5R1Q8NH85 324 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 LRRC29Q8WV35 223 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 PKP2Q99959 881 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 DNTTIP1Q9H147 329 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 TLNRD1Q9H1K6 362 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 RASSF4Q9H2L5 321 aa8.96□□□□□ -0.98
USP1-204ENST00000452143 CENPMQ9NSP4 180 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms