RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 ABCD4O14678 606 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 GALR2O43603 387 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-204ENST00000448183 OR2J2O76002 312 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 LIMS3P0CW19 117 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 LIMS4P0CW20 117 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 KCNJ3P48549 501 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 LBX1P52954 281 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 PMP22Q01453 160 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 OR4S1Q8NGB4 309 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 MRGPRX4Q96LA9 322 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 CHRDL1Q9BU40 450 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 EGLN1Q9GZT9 426 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 CLCF1Q9UBD9 225 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 CACFD1Q9UGQ2 172 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 OR51B4Q9Y5P0 310 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 DNAJC13O75165 2243 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 MYO7AQ13402 2215 aa7.03□□□□□ -1.28
NEDD9-204ENST00000448183 AQP7P3A6NL99 342 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 DHHO43323 396 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 OR5G3P0C626 314 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 FGF7P21781 194 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 IGFBP6P24592 240 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-204ENST00000448183 ARR3P36575 388 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 AKR1C3P42330 323 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 RAB13P51153 203 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 CDK5Q00535 292 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 HLXQ14774 488 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-204ENST00000448183 ELFN2Q5R3F8 820 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 TMPRSS11FQ6ZWK6 438 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 UBE3DQ7Z6J8 389 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 SLC24A4Q8NFF2 622 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 PP6455Q8WZ26 134 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 S1PR3Q99500 378 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 RCL1Q9Y2P8 373 aaKnown RBP7.02□□□□□ -1.29
NEDD9-204ENST00000448183 ARL2-SNX15V9GYD0 113 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-204ENST00000448183 CLEC18AA5D8T8 446 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 CRYM-AS1A6NIL9 109 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 PLPP2O43688 288 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 WNT1P04628 370 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 HNF1AP20823 631 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 RPS23P62266 143 aaKnown RBP7.02□□□□□ -1.29
NEDD9-204ENST00000448183 FAM53BQ14153 422 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 ST3GAL2Q16842 350 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 DRAM2Q6UX65 266 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 GTF2H5Q6ZYL4 71 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 SSX7Q7RTT5 188 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 OR2W3Q7Z3T1 314 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 MSRB3Q8IXL7 192 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 OSR2Q8N2R0 312 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 CLEC18CQ8NCF0 446 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 OTOSQ8NHW6 89 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 PINX1Q96BK5 328 aaKnown RBP7.02□□□□□ -1.29
NEDD9-204ENST00000448183 MARVELD1Q9BSK0 173 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 NUDT9Q9BW91 350 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 RAB18Q9NP72 206 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 MMP26Q9NRE1 261 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 MTFP1Q9UDX5 166 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 FBXO4Q9UKT5 387 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 FAM96BQ9Y3D0 163 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 FAM166BA8MTA8 275 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 SLC25A6P12236 298 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 ZNF121P58317 390 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-204ENST00000448183 KCNAB1Q14722 419 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 SSX1Q16384 188 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 OTPQ5XKR4 325 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 FBXL6Q8N531 539 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 SIGLEC7Q9Y286 467 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 MRPS2Q9Y399 296 aaKnown RBP7.02□□□□□ -1.29
NEDD9-204ENST00000448183 YTHDF2Q9Y5A9 579 aaKnown RBP7.02□□□□□ -1.29
NEDD9-204ENST00000448183 A0A087WUJ7 227 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 A0A0A6YYD5 115 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 SLC31A2O15432 143 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 HSBP1O75506 76 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 CST7O76096 145 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 MMP7P09237 267 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-204ENST00000448183 FPR2P25090 351 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 TPPP2P59282 170 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 KRTDAPP60985 99 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 FZD2Q14332 565 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 ZNF429Q86V71 674 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 SPICQ8N5J4 248 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 TMEM104Q8NE00 496 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 OR10G3Q8NGC4 313 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 ZNRF4Q8WWF5 429 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 MYEOVQ96EZ4 313 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 COMMD5Q9GZQ3 224 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 C6orf106Q9H6K1 298 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-204ENST00000448183 ADGRL4Q9HBW9 690 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 SPAG17Q6Q759 2223 aa7.02□□□□□ -1.29
NEDD9-204ENST00000448183 MAST2Q6P0Q8 1798 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 C5orf49A4QMS7 147 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 FRG2CA6NGY1 282 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 H3BP45 60 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 THBS4P35443 961 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 HNRNPA3P51991 378 aaKnown RBP7.01□□□□□ -1.29
NEDD9-204ENST00000448183 BPIFB3P59826 476 aa7.01□□□□□ -1.29
NEDD9-204ENST00000448183 ERHP84090 104 aaKnown RBP7.01□□□□□ -1.29
NEDD9-204ENST00000448183 MLF2Q15773 248 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-204ENST00000448183 RTL8BQ17RB0 113 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms