RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 TMEM65Q6PI78 240 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 OR6X1Q8NH79 312 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 TMEM171Q8WVE6 324 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 GATA6Q92908 595 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 RPEQ96AT9 228 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 RAB33BQ9H082 229 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 NSG2Q9Y328 171 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 A0A1W2PN81 502 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 LRP3O75074 770 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 AVPR2P30518 371 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 CHRNA7P36544 502 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 LSM6P62312 80 aaKnown RBP7.69□□□□□ -1.18
PTPN3-204ENST00000446349 PMS2CLQ68D20 193 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 RPS10P5Q9NQ39 176 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 OR10J4P0C629 311 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 TNFAIP6P98066 277 aaPredicted RBP7.69□□□□□ -1.18
PTPN3-204ENST00000446349 TCTN1Q2MV58 587 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 TMEM92Q6UXU6 159 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 ZFP82Q8N141 532 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 OR2Z1Q8NG97 314 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 NIPSNAP1Q9BPW8 284 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 TUBB1Q9H4B7 451 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 PIKFYVEQ9Y2I7 2098 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 WDR90Q96KV7 1748 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 A0A096LPE4 126 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 A0A1W2PPZ6 126 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 KRBOX1C9JBD0 128 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 TPPPO94811 219 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 SMIM17P0DL12 118 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 FUT3P21217 361 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 STARD6P59095 220 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 PRICKLE4Q2TBC4 344 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 DBX2Q6ZNG2 339 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 THNSL2Q86YJ6 484 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 ZNF441Q8N8Z8 693 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 ONECUT1Q9UBC0 465 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 FLVCR1Q9Y5Y0 555 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 TGOLN2O43493 480 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 HTR2BP41595 481 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 ANKRD16Q6P6B7 361 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 OR10G3Q8NGC4 313 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 FOXD3Q9UJU5 478 aaPredicted RBP7.69□□□□□ -1.18
PTPN3-204ENST00000446349 ST3GAL6Q9Y274 331 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 TNS1Q9HBL0 1735 aaKnown RBP7.69□□□□□ -1.18
PTPN3-204ENST00000446349 EFSO43281 561 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 COX6B1P14854 86 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 HOXD11P31277 338 aaPredicted RBP7.69□□□□□ -1.18
PTPN3-204ENST00000446349 LINC00596Q86U02 117 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 SPICQ8N5J4 248 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 ZNF485Q8NCK3 441 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 OR6S1Q8NH40 331 aa7.69□□□□□ -1.18
PTPN3-204ENST00000446349 FGF2P09038 288 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 HOXB1P14653 301 aaPredicted RBP7.68□□□□□ -1.18
PTPN3-204ENST00000446349 DRD3P35462 400 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 INO80CQ6PI98 192 aaPredicted RBP7.68□□□□□ -1.18
PTPN3-204ENST00000446349 ARRDC1Q8N5I2 433 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 OR10D3Q8NH80 312 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 PAQR8Q8TEZ7 354 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 TM4SF19Q96DZ7 209 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 PCYT1BQ9Y5K3 369 aaPredicted RBP7.68□□□□□ -1.18
PTPN3-204ENST00000446349 RP1P56715 2156 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 SBF1O95248 1867 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 A0A1B0GUH1 482 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 DHRS3O75911 302 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 IFI6P09912 130 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 PTPN6P29350 595 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 DESI1Q6ICB0 168 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 TCTE3Q8IZS6 198 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 SUCNR1Q9BXA5 334 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 AAMDCQ9H7C9 122 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 SCN10AQ9Y5Y9 1956 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 TRAPPC2P0DI81 140 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 TRAPPC2BP0DI82 140 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 LIPCP11150 499 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 B4GALT1P15291 398 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 APEX1P27695 318 aaKnown RBP7.68□□□□□ -1.18
PTPN3-204ENST00000446349 UBE2KP61086 200 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 CDK5R1Q15078 307 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 OR5M9Q8NGP3 310 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 OR13F1Q8NGS4 319 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 DOK1Q99704 481 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 FAM90A27PA6NNH2 459 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 OR2F2O95006 317 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 MPGP29372 298 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 OR2F1Q13607 317 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 HIST2H3AQ71DI3 136 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 OTOSQ8NHW6 89 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 ROBO4Q8WZ75 1007 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 CNRIP1Q96F85 164 aaPredicted RBP7.68□□□□□ -1.18
PTPN3-204ENST00000446349 GMPPAQ96IJ6 420 aaPredicted RBP7.68□□□□□ -1.18
PTPN3-204ENST00000446349 SIRPB1O00241 398 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 GOSR1O95249 250 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 ORM1P02763 201 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 WIPI1Q5MNZ9 446 aaPredicted RBP7.68□□□□□ -1.18
PTPN3-204ENST00000446349 CCDC144NLQ6NUI1 221 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 PNPLA1Q8N8W4 532 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 OR4C3Q8NH37 302 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 HEXA-AS1Q9H8Q6 139 aa7.68□□□□□ -1.18
PTPN3-204ENST00000446349 A8MV72 311 aaPredicted RBP7.68□□□□□ -1.18
PTPN3-204ENST00000446349 PPP1CBP62140 327 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms