RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 UBE2V2Q15819 145 aa16.3■□□□□ 0.2
POLR1E-203ENST00000442009 OR2A2Q6IF42 318 aa16.3■□□□□ 0.2
POLR1E-203ENST00000442009 ZNF584Q8IVC4 421 aa16.3■□□□□ 0.2
POLR1E-203ENST00000442009 PAQR4Q8N4S7 273 aaPredicted RBP16.3■□□□□ 0.2
POLR1E-203ENST00000442009 DUSP18Q8NEJ0 188 aa16.3■□□□□ 0.2
POLR1E-203ENST00000442009 C15orf40Q8WUR7 153 aa16.3■□□□□ 0.2
POLR1E-203ENST00000442009 REEP6Q96HR9 211 aa16.3■□□□□ 0.2
POLR1E-203ENST00000442009 BOD1Q96IK1 185 aa16.3■□□□□ 0.2
POLR1E-203ENST00000442009 DSPP15924 2871 aaKnown RBP16.3■□□□□ 0.2
POLR1E-203ENST00000442009 GGT3PA6NGU5 568 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 GABARAPH6UMI1 98 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 PFDN1O60925 122 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 EDN3P14138 238 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 FAHP16930 419 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 RAB6AP20340 208 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 MAP2K3P46734 347 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 MRPS10P82664 201 aaKnown RBP16.29■□□□□ 0.2
POLR1E-203ENST00000442009 HIKESHIQ53FT3 197 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 SEM1Q6ZVN7 128 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 ITPKCQ96DU7 683 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 POM121L2Q96KW2 1035 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 C1orf147Q96MC9 270 aaPredicted RBP16.29■□□□□ 0.2
POLR1E-203ENST00000442009 PIGLQ9Y2B2 252 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 TP53TG5Q9Y2B4 290 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 TLN1Q9Y490 2541 aaKnown RBP16.29■□□□□ 0.2
POLR1E-203ENST00000442009 MBD3L4A6NDZ8 208 aaPredicted RBP16.29■□□□□ 0.2
POLR1E-203ENST00000442009 MBD3L3A6NE82 208 aaPredicted RBP16.29■□□□□ 0.2
POLR1E-203ENST00000442009 MBD3L5A6NJ08 208 aaPredicted RBP16.29■□□□□ 0.2
POLR1E-203ENST00000442009 RRP8O43159 456 aaKnown RBP16.29■□□□□ 0.2
POLR1E-203ENST00000442009 BPNT1O95861 308 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 IGHV1-2P23083 117 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 Q6ZT83 130 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 CELF2-AS1Q8N7Q2 184 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 SEMA6DQ8NFY4 1073 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 OR6K3Q8NGY3 331 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 MBD3L2Q8NHZ7 208 aaPredicted RBP16.29■□□□□ 0.2
POLR1E-203ENST00000442009 PLSCR4Q9NRQ2 329 aa16.29■□□□□ 0.2
POLR1E-203ENST00000442009 hCG_38984A0A1B0GV85 526 aa16.28■□□□□ 0.2
POLR1E-203ENST00000442009 ORC5O43913 435 aa16.28■□□□□ 0.2
POLR1E-203ENST00000442009 KDM4BO94953 1096 aa16.28■□□□□ 0.2
POLR1E-203ENST00000442009 CD79AP11912 226 aa16.28■□□□□ 0.2
POLR1E-203ENST00000442009 STOMP27105 288 aa16.28■□□□□ 0.2
POLR1E-203ENST00000442009 FAM3AP98173 230 aa16.28■□□□□ 0.2
POLR1E-203ENST00000442009 ZNF92Q03936 586 aa16.28■□□□□ 0.2
POLR1E-203ENST00000442009 FOXF2Q12947 444 aa16.28■□□□□ 0.2
POLR1E-203ENST00000442009 GPR176Q14439 515 aa16.28■□□□□ 0.2
POLR1E-203ENST00000442009 TBRG1Q3YBR2 411 aa16.28■□□□□ 0.2
POLR1E-203ENST00000442009 KRTCAP3Q53RY4 240 aa16.28■□□□□ 0.2
POLR1E-203ENST00000442009 ZNF57Q68EA5 555 aaPredicted RBP16.28■□□□□ 0.2
POLR1E-203ENST00000442009 TMEM42Q69YG0 159 aa16.28■□□□□ 0.2
POLR1E-203ENST00000442009 RTL6Q6ICC9 239 aa16.28■□□□□ 0.2
POLR1E-203ENST00000442009 TMEM53Q6P2H8 277 aa16.28■□□□□ 0.2
POLR1E-203ENST00000442009 OR52I2Q8NH67 350 aa16.28■□□□□ 0.2
POLR1E-203ENST00000442009 SNRNP27Q8WVK2 155 aaKnown RBP16.28■□□□□ 0.2
POLR1E-203ENST00000442009 AUNIPQ9H7T9 357 aa16.28■□□□□ 0.2
POLR1E-203ENST00000442009 DIABLOQ9NR28 239 aa16.28■□□□□ 0.2
POLR1E-203ENST00000442009 TNFSF13O75888 250 aa16.27■□□□□ 0.2
POLR1E-203ENST00000442009 INPP1P49441 399 aa16.27■□□□□ 0.2
POLR1E-203ENST00000442009 UNC119Q13432 240 aa16.27■□□□□ 0.2
POLR1E-203ENST00000442009 KLF9Q13886 244 aaPredicted RBP16.27■□□□□ 0.2
POLR1E-203ENST00000442009 OR8B8Q15620 311 aa16.27■□□□□ 0.2
POLR1E-203ENST00000442009 OR10K2Q6IF99 312 aa16.27■□□□□ 0.2
POLR1E-203ENST00000442009 MZT2BQ6NZ67 158 aa16.27■□□□□ 0.2
POLR1E-203ENST00000442009 ZNF585AQ6P3V2 769 aa16.27■□□□□ 0.2
POLR1E-203ENST00000442009 ANGPTL5Q86XS5 388 aa16.27■□□□□ 0.2
POLR1E-203ENST00000442009 Q8NA96 180 aa16.27■□□□□ 0.2
POLR1E-203ENST00000442009 EXTL1Q92935 676 aa16.27■□□□□ 0.2
POLR1E-203ENST00000442009 GCDHQ92947 438 aaPredicted RBP16.27■□□□□ 0.2
POLR1E-203ENST00000442009 SPACA5Q96QH8 159 aa16.27■□□□□ 0.2
POLR1E-203ENST00000442009 NEURL2Q9BR09 285 aa16.27■□□□□ 0.2
POLR1E-203ENST00000442009 A0A0A6YYH2 397 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 A6NJ64 397 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 TMEM14DPA8MWL7 114 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 XRCC2O43543 280 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 VSIG8P0DPA2 414 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 SLC6A1P30531 599 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 ALDH3B1P43353 468 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 SRP9P49458 86 aaKnown RBP16.26■□□□□ 0.19
POLR1E-203ENST00000442009 GSK3AP49840 483 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 RIPPLY1Q0D2K3 151 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 SF3B4Q15427 424 aaKnown RBP eCLIP16.26■□□□□ 0.19
POLR1E-203ENST00000442009 MTFR2Q6P444 385 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 VWA1Q6PCB0 445 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 PPP1R14BQ96C90 147 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 ATG5Q9H1Y0 275 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 LUZP4Q9P127 313 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 RAB22AQ9UL26 194 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 RP1L1Q8IWN7 2480 aaPredicted RBP16.26■□□□□ 0.19
POLR1E-203ENST00000442009 TOXO94900 526 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 CGAP01215 116 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 NAT2P11245 290 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 PTHLHP12272 177 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 COX5AP20674 150 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 BTCP35070 178 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 GDNFP39905 211 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 TGFBR3Q03167 851 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 KISS1Q15726 138 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 GABRA6Q16445 453 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 GSG1Q2KHT4 349 aa16.26■□□□□ 0.19
POLR1E-203ENST00000442009 KRT74Q7RTS7 529 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms