RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 CXorf40AQ8TE69 158 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 C2orf15Q8WU43 125 aaKnown RBP6.72□□□□□ -1.33
HDAC9-214ENST00000441542 RAB39BQ96DA2 213 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 SAT2Q96F10 170 aaPredicted RBP6.72□□□□□ -1.33
HDAC9-214ENST00000441542 DPEP2Q9H4A9 486 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 ADAM29Q9UKF5 820 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 CYP8B1Q9UNU6 501 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 SLCO1B1Q9Y6L6 691 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 PLXNB3Q9ULL4 1909 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 VWA8A3KMH1 1905 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 TRBV5-5A0A0J9YX44 114 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 AMY2BP19961 511 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 PPM1AP35813 382 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 IGFALSP35858 605 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 GABRA4P48169 554 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 SULT1A2P50226 295 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 RAB28P51157 221 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 CCL20P78556 96 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 ENPP2Q13822 863 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 TMEM35AQ53FP2 167 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 TCEAL5Q5H9L2 206 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 ASPHD2Q6ICH7 369 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 TCEAL6Q6IPX3 200 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 DPY19L2P2Q6ZN68 376 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 DGAT2L6Q6ZPD8 337 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 TMEM123Q8N131 208 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 ZFP62Q8NB50 900 aaPredicted RBP6.72□□□□□ -1.33
HDAC9-214ENST00000441542 Q8NFD4 153 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 OVCA2Q8WZ82 227 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 FRZBQ92765 325 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 TOMM40LQ969M1 308 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 FGGYQ96C11 551 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 FAM122AQ96E09 287 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 WDR92Q96MX6 357 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 SERTAD3Q9UJW9 196 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 FLVCR1Q9Y5Y0 555 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 SEC14L6B5MCN3 397 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 HCRTR2O43614 444 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 PF4V1P10720 104 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 SLC2A1P11166 492 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 RPL29P47914 159 aaKnown RBP6.72□□□□□ -1.33
HDAC9-214ENST00000441542 ARRB1P49407 418 aaPredicted RBP6.72□□□□□ -1.33
HDAC9-214ENST00000441542 ERVFRD-1P60508 538 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 EIF5AP63241 154 aaKnown RBP6.72□□□□□ -1.33
HDAC9-214ENST00000441542 CYCSP99999 105 aaKnown RBP6.72□□□□□ -1.33
HDAC9-214ENST00000441542 UBE2V2Q15819 145 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 TCTN1Q2MV58 587 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 HIST2H3PS2Q5TEC6 136 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 C1QL3Q5VWW1 255 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 AWAT2Q6E213 333 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 ZNF880Q6PDB4 577 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 HEPN1Q6WQI6 88 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 SUMF1Q8NBK3 374 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 OR4C3Q8NH37 302 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 DTD1Q8TEA8 209 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 RNF128Q8TEB7 428 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 IRF7Q92985 503 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 SHDQ96IW2 340 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 TEX101Q9BY14 249 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 BCO1Q9HAY6 547 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.72□□□□□ -1.33
HDAC9-214ENST00000441542 C19orf12Q9NSK7 152 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 ZNF701Q9NV72 531 aaPredicted RBP6.72□□□□□ -1.33
HDAC9-214ENST00000441542 VSX1Q9NZR4 365 aaPredicted RBP6.72□□□□□ -1.33
HDAC9-214ENST00000441542 TBC1D29Q9UFV1 150 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 OR14J1Q9UGF5 321 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 B3GALT1Q9Y5Z6 326 aa6.72□□□□□ -1.33
HDAC9-214ENST00000441542 SDK1Q7Z5N4 2213 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 COL4A4P53420 1690 aaPredicted RBP6.71□□□□□ -1.33
HDAC9-214ENST00000441542 WIPF3A6NGB9 483 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 ZNF878C9JN71 531 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 H3BQ15 152 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 XKRYO14609 159 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 RENP00797 406 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 MBPP02686 304 aaPredicted RBP6.71□□□□□ -1.33
HDAC9-214ENST00000441542 HKR1P10072 659 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 PAX6P26367 422 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 SNCAP37840 140 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 RBMXP38159 391 aaKnown RBP6.71□□□□□ -1.33
HDAC9-214ENST00000441542 ACAA2P42765 397 aaKnown RBP6.71□□□□□ -1.33
HDAC9-214ENST00000441542 EMP2P54851 167 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 TRA2BP62995 288 aaKnown RBP6.71□□□□□ -1.33
HDAC9-214ENST00000441542 NAAAQ02083 359 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 DEFB110Q30KQ9 67 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 RABEPKQ7Z6M1 372 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 KLHDC3Q9BQ90 382 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 PCBD2Q9H0N5 130 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 SLC35B3Q9H1N7 401 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 C5orf66Q9H5L9 145 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 CNTD2Q9H8S5 307 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 PADI1Q9ULC6 663 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 HDGFL3Q9Y3E1 203 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 LIPGQ9Y5X9 500 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 COLEC10Q9Y6Z7 277 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 SPACA6W5XKT8 324 aa6.71□□□□□ -1.33
HDAC9-214ENST00000441542 COL4A3Q01955 1670 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 PRUNE2Q8WUY3 3088 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 TRBV5-7A0A0A0MS05 114 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 ABHD16AO95870 558 aa6.71□□□□□ -1.34
HDAC9-214ENST00000441542 IGKV1D-16P01601 117 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms