RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 CHD8Q9HCK8 2581 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 DOT1LQ8TEK3 1739 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 KBTBD11-OT1A0A1B0GTJ5 212 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 C5orf63A6NC05 138 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 NCF1BA6NI72 391 aaPredicted RBP2.06□□□□□ -2.08
VPS41-207ENST00000439468 NCF1CA8MVU1 366 aaPredicted RBP2.06□□□□□ -2.08
VPS41-207ENST00000439468 AKR7A2O43488 359 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 RAD51CO43502 376 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 FCN3O75636 299 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 SLC25A14O95258 325 aaPredicted RBP2.06□□□□□ -2.08
VPS41-207ENST00000439468 LSM8O95777 96 aaKnown RBP2.06□□□□□ -2.08
VPS41-207ENST00000439468 ASGR1P07306 291 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 MRPL3P09001 348 aaKnown RBP2.06□□□□□ -2.08
VPS41-207ENST00000439468 ZNF806P0C7X5 589 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 HMOX2P30519 316 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 SSTR5P35346 364 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 RAB9AP51151 201 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 P2RX1P51575 399 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 VSX2P58304 361 aaPredicted RBP2.06□□□□□ -2.08
VPS41-207ENST00000439468 UBE2NP61088 152 aaKnown RBP2.06□□□□□ -2.08
VPS41-207ENST00000439468 PPP1CBP62140 327 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 ARG2P78540 354 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 EIF4EBP1Q13541 118 aaPredicted RBP2.06□□□□□ -2.08
VPS41-207ENST00000439468 IL18Q14116 193 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 UBE2UQ5VVX9 321 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 SSX9Q7RTT3 188 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 ABHD12BQ7Z5M8 362 aaPredicted RBP2.06□□□□□ -2.08
VPS41-207ENST00000439468 FAM71AQ8IYT1 594 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 SNX31Q8N9S9 440 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 CHST4Q8NCG5 386 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 C15orf40Q8WUR7 153 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 RNF145Q96MT1 663 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 ANP32EQ9BTT0 268 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 ZYG11BQ9C0D3 744 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 ELOVL6Q9H5J4 265 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 AUNIPQ9H7T9 357 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 SLC38A10Q9HBR0 1119 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 FAM49BQ9NUQ9 324 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 NECAP2Q9NVZ3 263 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 CLN8Q9UBY8 286 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 BDP1A6H8Y1 2624 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 MYO10Q9HD67 2058 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 DNAH14Q0VDD8 3507 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 CCDC141Q6ZP82 1450 aa2.06□□□□□ -2.08
VPS41-207ENST00000439468 EPG5Q9HCE0 2579 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 FER1L6Q2WGJ9 1857 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 KIAA0100Q14667 2235 aaKnown RBP2.05□□□□□ -2.08
VPS41-207ENST00000439468 SMIM26A0A096LP01 95 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 TRAV25A0A0B4J276 109 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 SUPT3HB4E1H0 165 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 GABRPO00591 440 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 PLPP1O14494 284 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 RAD51BO15315 384 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 NMT2O60551 498 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 AQP8O94778 261 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 IFNW1P05000 195 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 UBCP0CG48 685 aaKnown RBP2.05□□□□□ -2.08
VPS41-207ENST00000439468 CT45A6P0DMU7 189 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 CT45A5P0DMU8 189 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 CT45A7P0DMV0 189 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 TCP1P17987 556 aaKnown RBP2.05□□□□□ -2.08
VPS41-207ENST00000439468 GABRG2P18507 467 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 RFC3P40938 356 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 HCAR3P49019 387 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 LOXL1Q08397 574 aaPredicted RBP2.05□□□□□ -2.08
VPS41-207ENST00000439468 MOBPQ13875 183 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 DEFB115Q30KQ5 88 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 TRMT5Q32P41 509 aaKnown RBP2.05□□□□□ -2.08
VPS41-207ENST00000439468 SMUG1Q53HV7 270 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 CT45A1Q5HYN5 189 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 GCSAMLQ5JQS6 135 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 FAM78AQ5JUQ0 283 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 SPESP1Q6UW49 350 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 MBOAT2Q6ZWT7 520 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 WDR86Q86TI4 376 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 LGI3Q8N145 548 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 CBR4Q8N4T8 237 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 COX18Q8N8Q8 333 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 BBOF1Q8ND07 529 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 CT45A3Q8NHU0 189 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 COQ8AQ8NI60 647 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 FRZBQ92765 325 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 FOPNLQ96NB1 174 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 MTG1Q9BT17 334 aaPredicted RBP2.05□□□□□ -2.08
VPS41-207ENST00000439468 MRM3Q9HC36 420 aaKnown RBP2.05□□□□□ -2.08
VPS41-207ENST00000439468 CYTL1Q9NRR1 136 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 ZNF835Q9Y2P0 537 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 UBIAD1Q9Y5Z9 338 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 MROH7Q68CQ1 1323 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 PCDH11XQ9BZA7 1347 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 CASKIN1Q8WXD9 1431 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 ERBINQ96RT1 1412 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 ASH1LQ9NR48 2969 aaKnown RBP2.05□□□□□ -2.08
VPS41-207ENST00000439468 REV3LO60673 3130 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 KIF1BO60333 1816 aa2.05□□□□□ -2.08
VPS41-207ENST00000439468 SPTBN4Q9H254 2564 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 IGLV1-50A0A075B6I6 118 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 IGKV2-28A0A075B6P5 120 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 KCNE1BA0A087WTH5 132 aa2.04□□□□□ -2.08
VPS41-207ENST00000439468 A0A0J9YXV3 536 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms