RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 TRMT61AQ96FX7 289 aaKnown RBP17.81■□□□□ 0.44
CHD3-204ENST00000439235 MARS2Q96GW9 593 aaKnown RBP17.81■□□□□ 0.44
CHD3-204ENST00000439235 SOX7Q9BT81 388 aa17.81■□□□□ 0.44
CHD3-204ENST00000439235 ZNF275Q9NSD4 429 aaPredicted RBP17.81■□□□□ 0.44
CHD3-204ENST00000439235 RSL24D1Q9UHA3 163 aaKnown RBP17.81■□□□□ 0.44
CHD3-204ENST00000439235 POU2F3Q9UKI9 436 aa17.81■□□□□ 0.44
CHD3-204ENST00000439235 RNF115Q9Y4L5 304 aa17.81■□□□□ 0.44
CHD3-204ENST00000439235 ATP23Q9Y6H3 246 aa17.81■□□□□ 0.44
CHD3-204ENST00000439235 DIDO1Q9BTC0 2240 aaKnown RBP17.81■□□□□ 0.44
CHD3-204ENST00000439235 DEFB108AA8MXU0 73 aa17.8■□□□□ 0.44
CHD3-204ENST00000439235 ZNF701M0R085 212 aaPredicted RBP17.8■□□□□ 0.44
CHD3-204ENST00000439235 DDOSTP39656 456 aa17.8■□□□□ 0.44
CHD3-204ENST00000439235 LSM3P62310 102 aaKnown RBP17.8■□□□□ 0.44
CHD3-204ENST00000439235 RIPPLY1Q0D2K3 151 aa17.8■□□□□ 0.44
CHD3-204ENST00000439235 HLXQ14774 488 aaPredicted RBP17.8■□□□□ 0.44
CHD3-204ENST00000439235 HSD17B12Q53GQ0 312 aa17.8■□□□□ 0.44
CHD3-204ENST00000439235 ZBTB37Q5TC79 503 aa17.8■□□□□ 0.44
CHD3-204ENST00000439235 MBNL2Q5VZF2 373 aaKnown RBP17.8■□□□□ 0.44
CHD3-204ENST00000439235 ADAM5Q6NVV9 412 aa17.8■□□□□ 0.44
CHD3-204ENST00000439235 FTMTQ8N4E7 242 aa17.8■□□□□ 0.44
CHD3-204ENST00000439235 CSNK2A3Q8NEV1 391 aa17.8■□□□□ 0.44
CHD3-204ENST00000439235 PIK3IP1Q96FE7 263 aa17.8■□□□□ 0.44
CHD3-204ENST00000439235 KCTD7Q96MP8 289 aa17.8■□□□□ 0.44
CHD3-204ENST00000439235 CENPOQ9BU64 300 aa17.8■□□□□ 0.44
CHD3-204ENST00000439235 NOX4Q9NPH5 578 aa17.8■□□□□ 0.44
CHD3-204ENST00000439235 CKLFQ9UBR5 152 aa17.8■□□□□ 0.44
CHD3-204ENST00000439235 PIGLQ9Y2B2 252 aa17.8■□□□□ 0.44
CHD3-204ENST00000439235 GOSR1O95249 250 aa17.79■□□□□ 0.44
CHD3-204ENST00000439235 FSTP19883 344 aa17.79■□□□□ 0.44
CHD3-204ENST00000439235 MYL9P24844 172 aa17.79■□□□□ 0.44
CHD3-204ENST00000439235 THBS4P35443 961 aa17.79■□□□□ 0.44
CHD3-204ENST00000439235 CTF1Q16619 201 aa17.79■□□□□ 0.44
CHD3-204ENST00000439235 PARP16Q8N5Y8 322 aa17.79■□□□□ 0.44
CHD3-204ENST00000439235 ACBD4Q8NC06 268 aa17.79■□□□□ 0.44
CHD3-204ENST00000439235 OR56B2PQ8NGI1 322 aa17.79■□□□□ 0.44
CHD3-204ENST00000439235 KLF14Q8TD94 323 aaPredicted RBP17.79■□□□□ 0.44
CHD3-204ENST00000439235 PP6455Q8WZ26 134 aa17.79■□□□□ 0.44
CHD3-204ENST00000439235 FGGYQ96C11 551 aa17.79■□□□□ 0.44
CHD3-204ENST00000439235 CMBLQ96DG6 245 aa17.79■□□□□ 0.44
CHD3-204ENST00000439235 SLITRK2Q9H156 845 aa17.79■□□□□ 0.44
CHD3-204ENST00000439235 ZNF442Q9H7R0 627 aa17.79■□□□□ 0.44
CHD3-204ENST00000439235 ZNF816-ZNF321PA0A0X1KG74 233 aa17.78■□□□□ 0.44
CHD3-204ENST00000439235 CD300LBA8K4G0 201 aa17.78■□□□□ 0.44
CHD3-204ENST00000439235 VSTM5A8MXK1 200 aa17.78■□□□□ 0.44
CHD3-204ENST00000439235 SHISA9B4DS77 424 aa17.78■□□□□ 0.44
CHD3-204ENST00000439235 SLC22A1O15245 554 aa17.78■□□□□ 0.44
CHD3-204ENST00000439235 LMX1BO60663 402 aa17.78■□□□□ 0.44
CHD3-204ENST00000439235 FAHP16930 419 aa17.78■□□□□ 0.44
CHD3-204ENST00000439235 ACKR3P25106 362 aa17.78■□□□□ 0.44
CHD3-204ENST00000439235 CALRP27797 417 aaKnown RBP17.78■□□□□ 0.44
CHD3-204ENST00000439235 GNALP38405 381 aa17.78■□□□□ 0.44
CHD3-204ENST00000439235 MAGEB1P43366 347 aa17.78■□□□□ 0.44
CHD3-204ENST00000439235 NCS1P62166 190 aa17.78■□□□□ 0.44
CHD3-204ENST00000439235 FAM27D1Q5T7N8 215 aa17.78■□□□□ 0.44
CHD3-204ENST00000439235 VHLLQ6RSH7 139 aa17.78■□□□□ 0.44
CHD3-204ENST00000439235 SERPINA12Q8IW75 414 aa17.78■□□□□ 0.44
CHD3-204ENST00000439235 KBTBD8Q8NFY9 601 aa17.78■□□□□ 0.44
CHD3-204ENST00000439235 HAVCR1Q96D42 359 aa17.78■□□□□ 0.44
CHD3-204ENST00000439235 DGCR14Q96DF8 476 aaKnown RBP17.78■□□□□ 0.44
CHD3-204ENST00000439235 ADAT3Q96EY9 351 aaPredicted RBP17.78■□□□□ 0.44
CHD3-204ENST00000439235 SPOCK3Q9BQ16 436 aa17.78■□□□□ 0.44
CHD3-204ENST00000439235 CA10Q9NS85 328 aa17.78■□□□□ 0.44
CHD3-204ENST00000439235 CMAHPQ9Y471 501 aa17.78■□□□□ 0.44
CHD3-204ENST00000439235 A0A1W2PPK0 400 aa17.77■□□□□ 0.44
CHD3-204ENST00000439235 PIN1P1O15428 100 aa17.77■□□□□ 0.44
CHD3-204ENST00000439235 SIAH2O43255 324 aa17.77■□□□□ 0.44
CHD3-204ENST00000439235 ZNF250P15622 560 aa17.77■□□□□ 0.44
CHD3-204ENST00000439235 MPV17P39210 176 aa17.77■□□□□ 0.44
CHD3-204ENST00000439235 PRSS12P56730 875 aa17.77■□□□□ 0.44
CHD3-204ENST00000439235 SELENOVP59797 346 aa17.77■□□□□ 0.44
CHD3-204ENST00000439235 VBP1P61758 197 aa17.77■□□□□ 0.44
CHD3-204ENST00000439235 PPP3R1P63098 170 aa17.77■□□□□ 0.44
CHD3-204ENST00000439235 DAZAP2Q15038 168 aaPredicted RBP17.77■□□□□ 0.44
CHD3-204ENST00000439235 OR5D14Q8NGL3 314 aa17.77■□□□□ 0.44
CHD3-204ENST00000439235 SYNPRQ8TBG9 265 aa17.77■□□□□ 0.44
CHD3-204ENST00000439235 TMEM171Q8WVE6 324 aa17.77■□□□□ 0.44
CHD3-204ENST00000439235 C12orf43Q96C57 262 aaKnown RBP17.77■□□□□ 0.44
CHD3-204ENST00000439235 TCF7L1Q9HCS4 588 aa17.77■□□□□ 0.44
CHD3-204ENST00000439235 KCNN3Q9UGI6 736 aa17.77■□□□□ 0.44
CHD3-204ENST00000439235 IQCF6A8MYZ5 107 aa17.76■□□□□ 0.43
CHD3-204ENST00000439235 H3BMQ9 156 aa17.76■□□□□ 0.43
CHD3-204ENST00000439235 KITLGP21583 273 aa17.76■□□□□ 0.43
CHD3-204ENST00000439235 LOXP28300 417 aaPredicted RBP17.76■□□□□ 0.43
CHD3-204ENST00000439235 MTNR1BP49286 362 aa17.76■□□□□ 0.43
CHD3-204ENST00000439235 FABP6P51161 128 aa17.76■□□□□ 0.43
CHD3-204ENST00000439235 KLF3P57682 345 aaPredicted RBP17.76■□□□□ 0.43
CHD3-204ENST00000439235 TNK1Q13470 666 aa17.76■□□□□ 0.43
CHD3-204ENST00000439235 CLVS2Q5SYC1 327 aa17.76■□□□□ 0.43
CHD3-204ENST00000439235 OR2T2Q6IF00 324 aa17.76■□□□□ 0.43
CHD3-204ENST00000439235 TMEM204Q9BSN7 226 aa17.76■□□□□ 0.43
CHD3-204ENST00000439235 CHST5Q9GZS9 411 aa17.76■□□□□ 0.43
CHD3-204ENST00000439235 ZCCHC4Q9H5U6 513 aa17.76■□□□□ 0.43
CHD3-204ENST00000439235 RNF167Q9H6Y7 350 aa17.76■□□□□ 0.43
CHD3-204ENST00000439235 SNTG1Q9NSN8 517 aa17.76■□□□□ 0.43
CHD3-204ENST00000439235 TAS2R4Q9NYW5 299 aa17.76■□□□□ 0.43
CHD3-204ENST00000439235 PURGQ9UJV8 347 aaKnown RBP17.76■□□□□ 0.43
CHD3-204ENST00000439235 FOXJ3Q9UPW0 622 aa17.76■□□□□ 0.43
CHD3-204ENST00000439235 HECTD1Q9ULT8 2610 aa17.75■□□□□ 0.43
CHD3-204ENST00000439235 TRAV1-2A0A0B4J238 106 aa17.75■□□□□ 0.43
CHD3-204ENST00000439235 ANKRD61A6NGH8 418 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms