RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 MXD1Q05195 221 aa19.81■□□□□ 0.76
CPSF4-204ENST00000436336 TNK1Q13470 666 aa19.81■□□□□ 0.76
CPSF4-204ENST00000436336 SNTB1Q13884 538 aaKnown RBP19.81■□□□□ 0.76
CPSF4-204ENST00000436336 HLXQ14774 488 aaPredicted RBP19.81■□□□□ 0.76
CPSF4-204ENST00000436336 ASPHD2Q6ICH7 369 aa19.81■□□□□ 0.76
CPSF4-204ENST00000436336 FBXW12Q6X9E4 464 aa19.81■□□□□ 0.76
CPSF4-204ENST00000436336 OR5D14Q8NGL3 314 aa19.81■□□□□ 0.76
CPSF4-204ENST00000436336 SLC25A40Q8TBP6 338 aa19.81■□□□□ 0.76
CPSF4-204ENST00000436336 NPDC1Q9NQX5 325 aaPredicted RBP19.81■□□□□ 0.76
CPSF4-204ENST00000436336 ZNF462Q96JM2 2506 aa19.81■□□□□ 0.76
CPSF4-204ENST00000436336 DPRXA6NFQ7 191 aa19.8■□□□□ 0.76
CPSF4-204ENST00000436336 ANKRD61A6NGH8 418 aa19.8■□□□□ 0.76
CPSF4-204ENST00000436336 A6NIN4 97 aa19.8■□□□□ 0.76
CPSF4-204ENST00000436336 IGFBP3P17936 291 aaPredicted RBP19.8■□□□□ 0.76
CPSF4-204ENST00000436336 ACKR3P25106 362 aa19.8■□□□□ 0.76
CPSF4-204ENST00000436336 THBS4P35443 961 aa19.8■□□□□ 0.76
CPSF4-204ENST00000436336 GNALP38405 381 aa19.8■□□□□ 0.76
CPSF4-204ENST00000436336 PEX19P40855 299 aa19.8■□□□□ 0.76
CPSF4-204ENST00000436336 OR2J1Q9GZK6 312 aa19.8■□□□□ 0.76
CPSF4-204ENST00000436336 TAS2R4Q9NYW5 299 aa19.8■□□□□ 0.76
CPSF4-204ENST00000436336 TRAV8-7A0A075B6U6 113 aa19.79■□□□□ 0.76
CPSF4-204ENST00000436336 DDOSTP39656 456 aa19.79■□□□□ 0.76
CPSF4-204ENST00000436336 ERVS71-1P61550 626 aa19.79■□□□□ 0.76
CPSF4-204ENST00000436336 SPATA46Q5T0L3 261 aa19.79■□□□□ 0.76
CPSF4-204ENST00000436336 ZBTB37Q5TC79 503 aa19.79■□□□□ 0.76
CPSF4-204ENST00000436336 PP6455Q8WZ26 134 aa19.79■□□□□ 0.76
CPSF4-204ENST00000436336 DACH2Q96NX9 599 aa19.79■□□□□ 0.76
CPSF4-204ENST00000436336 TPK1Q9H3S4 243 aa19.79■□□□□ 0.76
CPSF4-204ENST00000436336 ESRP2Q9H6T0 727 aaKnown RBP19.79■□□□□ 0.76
CPSF4-204ENST00000436336 GGT3PA6NGU5 568 aa19.79■□□□□ 0.76
CPSF4-204ENST00000436336 PDCD5O14737 125 aa19.79■□□□□ 0.76
CPSF4-204ENST00000436336 CLEC2LP0C7M8 214 aa19.79■□□□□ 0.76
CPSF4-204ENST00000436336 FAHP16930 419 aa19.79■□□□□ 0.76
CPSF4-204ENST00000436336 RAB3BP20337 219 aa19.79■□□□□ 0.76
CPSF4-204ENST00000436336 PRSS12P56730 875 aa19.79■□□□□ 0.76
CPSF4-204ENST00000436336 BSPH1Q075Z2 132 aa19.79■□□□□ 0.76
CPSF4-204ENST00000436336 SPOCK1Q08629 439 aa19.79■□□□□ 0.76
CPSF4-204ENST00000436336 SNTB2Q13425 540 aaKnown RBP19.79■□□□□ 0.76
CPSF4-204ENST00000436336 SLC25A46Q96AG3 418 aa19.79■□□□□ 0.76
CPSF4-204ENST00000436336 MARS2Q96GW9 593 aaKnown RBP19.79■□□□□ 0.76
CPSF4-204ENST00000436336 ZCCHC4Q9H5U6 513 aa19.79■□□□□ 0.76
CPSF4-204ENST00000436336 ATP6V1G2-DDX39BF2Z307 99 aa19.78■□□□□ 0.76
CPSF4-204ENST00000436336 ABCD4O14678 606 aa19.78■□□□□ 0.76
CPSF4-204ENST00000436336 RAC2P15153 192 aa19.78■□□□□ 0.76
CPSF4-204ENST00000436336 PPP3R1P63098 170 aa19.78■□□□□ 0.76
CPSF4-204ENST00000436336 NKX6-1P78426 367 aaPredicted RBP19.78■□□□□ 0.76
CPSF4-204ENST00000436336 NCMAPQ5T1S8 102 aa19.78■□□□□ 0.76
CPSF4-204ENST00000436336 LRRTM1Q86UE6 522 aa19.78■□□□□ 0.76
CPSF4-204ENST00000436336 PIAS4Q8N2W9 510 aaPredicted RBP19.78■□□□□ 0.76
CPSF4-204ENST00000436336 CSNK2A3Q8NEV1 391 aa19.78■□□□□ 0.76
CPSF4-204ENST00000436336 OR56B2PQ8NGI1 322 aa19.78■□□□□ 0.76
CPSF4-204ENST00000436336 RADILQ96JH8 1075 aa19.78■□□□□ 0.76
CPSF4-204ENST00000436336 CHST5Q9GZS9 411 aa19.78■□□□□ 0.76
CPSF4-204ENST00000436336 PTTG2Q9NZH5 202 aa19.78■□□□□ 0.76
CPSF4-204ENST00000436336 WIPF3A6NGB9 483 aa19.77■□□□□ 0.76
CPSF4-204ENST00000436336 MAS1P04201 325 aa19.77■□□□□ 0.76
CPSF4-204ENST00000436336 GLRXP35754 106 aa19.77■□□□□ 0.76
CPSF4-204ENST00000436336 ZNF529Q6P280 563 aa19.77■□□□□ 0.76
CPSF4-204ENST00000436336 UTS2BQ765I0 119 aa19.77■□□□□ 0.76
CPSF4-204ENST00000436336 OR1M1Q8NGA1 313 aa19.77■□□□□ 0.76
CPSF4-204ENST00000436336 KLF14Q8TD94 323 aaPredicted RBP19.77■□□□□ 0.76
CPSF4-204ENST00000436336 CMBLQ96DG6 245 aa19.77■□□□□ 0.76
CPSF4-204ENST00000436336 CCDC59Q9P031 241 aaKnown RBP19.77■□□□□ 0.76
CPSF4-204ENST00000436336 CADP27708 2225 aa19.77■□□□□ 0.76
CPSF4-204ENST00000436336 ZNF816-ZNF321PA0A0X1KG74 233 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 CD300LBA8K4G0 201 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 PYCARD-AS1I3L0S3 204 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 RAB3AP20336 220 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 SOX6P35712 828 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 RORCP51449 518 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 RPS23P62266 143 aaKnown RBP19.76■□□□□ 0.75
CPSF4-204ENST00000436336 DGUOKQ16854 277 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 ZNF718Q3SXZ3 478 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 RGS7BPQ6MZT1 257 aaPredicted RBP19.76■□□□□ 0.75
CPSF4-204ENST00000436336 KRT74Q7RTS7 529 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 FTMTQ8N4E7 242 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 NUP37Q8NFH4 326 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 HAVCR1Q96D42 359 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 AK6Q9Y3D8 172 aaKnown RBP19.76■□□□□ 0.75
CPSF4-204ENST00000436336 SULT1B1O43704 296 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 SELEP16581 610 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 ADRA2CP18825 462 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 CEP78Q5JTW2 689 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 MBNL2Q5VZF2 373 aaKnown RBP19.76■□□□□ 0.75
CPSF4-204ENST00000436336 TMEM42Q69YG0 159 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 OR13C9Q8NGT0 318 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 PLPPR2Q96GM1 343 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 KCNN3Q9UGI6 736 aa19.76■□□□□ 0.75
CPSF4-204ENST00000436336 SPTBN1Q01082 2364 aaKnown RBP19.76■□□□□ 0.75
CPSF4-204ENST00000436336 CHD6Q8TD26 2715 aa19.75■□□□□ 0.75
CPSF4-204ENST00000436336 SMIM30A4D0T7 59 aa19.75■□□□□ 0.75
CPSF4-204ENST00000436336 MEGF11A6BM72 1044 aa19.75■□□□□ 0.75
CPSF4-204ENST00000436336 ALX3O95076 343 aa19.75■□□□□ 0.75
CPSF4-204ENST00000436336 GCH1P30793 250 aa19.75■□□□□ 0.75
CPSF4-204ENST00000436336 PSMD7P51665 324 aa19.75■□□□□ 0.75
CPSF4-204ENST00000436336 HNRNPA0Q13151 305 aaKnown RBP19.75■□□□□ 0.75
CPSF4-204ENST00000436336 BEX5Q5H9J7 111 aa19.75■□□□□ 0.75
CPSF4-204ENST00000436336 CLVS2Q5SYC1 327 aa19.75■□□□□ 0.75
CPSF4-204ENST00000436336 OR2T2Q6IF00 324 aa19.75■□□□□ 0.75
CPSF4-204ENST00000436336 SLC22A25Q6T423 547 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms