RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 COL27A1Q8IZC6 1860 aaPredicted RBP2.29□□□□□ -2.04
LINC00353-201ENST00000435401 MROH7Q68CQ1 1323 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 IGSF9BQ9UPX0 1349 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 TRBV9A0A0B4J1U6 114 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 SERTM2A0A1B0GWG4 89 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 SMKR1H3BMG3 65 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 HUS1O60921 280 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 RDH16O75452 317 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 RP2O75695 350 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 PLEKHA8P1O95397 391 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 CTDNEP1O95476 244 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 UBTFL6P0CB48 400 aaPredicted RBP2.29□□□□□ -2.04
LINC00353-201ENST00000435401 MYL2P10916 166 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 RAB3BP20337 219 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 OR1E1P30953 314 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 OTX1P32242 354 aaPredicted RBP2.29□□□□□ -2.04
LINC00353-201ENST00000435401 NAMPTP43490 491 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 KIR3DL2P43630 455 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 UQCRFS1P47985 274 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 KRTAP10-10P60014 251 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 PFN3P60673 137 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 SYCNQ0VAF6 134 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 MERTKQ12866 999 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 XKR4Q5GH76 650 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 METTL21CQ5VZV1 264 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 CMC1Q7Z7K0 106 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 TMEM150AQ86TG1 271 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 BIVMQ86UB2 503 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 RIMKLAQ8IXN7 391 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 OFCC1Q8IZS5 231 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 OR4C5Q8NGB2 326 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 OR2A1Q8NGT9 310 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 LRRC29Q8WV35 223 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 ESR2Q92731 530 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 MCUR1Q96AQ8 359 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 EXOSC8Q96B26 276 aaKnown RBP2.29□□□□□ -2.04
LINC00353-201ENST00000435401 TM4SF18Q96CE8 201 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 PDXPQ96GD0 296 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 SPNS1Q9H2V7 528 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 RPP21Q9H633 154 aaKnown RBP2.29□□□□□ -2.04
LINC00353-201ENST00000435401 ZNF430Q9H8G1 570 aaPredicted RBP2.29□□□□□ -2.04
LINC00353-201ENST00000435401 EDA2RQ9HAV5 297 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 TMED5Q9Y3A6 229 aa2.29□□□□□ -2.04
LINC00353-201ENST00000435401 YTHDF2Q9Y5A9 579 aaKnown RBP2.29□□□□□ -2.04
LINC00353-201ENST00000435401 PHLPP2Q6ZVD8 1323 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 RAD50Q92878 1312 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 MYO9BQ13459 2157 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 IGHV5-10-1A0A0J9YXX1 117 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 ERICH2A1L162 156 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 E7EWF7 191 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 K7EMT4 169 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 NDUFAB1O14561 156 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 SLC9A3R1O14745 358 aaPredicted RBP2.28□□□□□ -2.04
LINC00353-201ENST00000435401 SCAMP2O15127 329 aaKnown RBP2.28□□□□□ -2.04
LINC00353-201ENST00000435401 CYTH3O43739 400 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 MED6O75586 246 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 CD160O95971 181 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 HLA-DPB1P04440 258 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 TPM2P07951 284 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 ERCC1P07992 297 aaPredicted RBP2.28□□□□□ -2.04
LINC00353-201ENST00000435401 IGFBP3P17936 291 aaPredicted RBP2.28□□□□□ -2.04
LINC00353-201ENST00000435401 F2RP25116 425 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 ESRRGP62508 458 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 CDH17Q12864 832 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 TRAM2Q15035 370 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 SF3A2Q15428 464 aaKnown RBP2.28□□□□□ -2.04
LINC00353-201ENST00000435401 HSDL1Q3SXM5 330 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 C1orf185Q5T7R7 199 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 PRMT9Q6P2P2 845 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 NTM-AS1Q6ZSK4 140 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 BZW1Q7L1Q6 419 aaKnown RBP2.28□□□□□ -2.04
LINC00353-201ENST00000435401 EIF3MQ7L2H7 374 aaKnown RBP2.28□□□□□ -2.04
LINC00353-201ENST00000435401 CENPQQ7L2Z9 268 aaPredicted RBP2.28□□□□□ -2.04
LINC00353-201ENST00000435401 SCD5Q86SK9 330 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 MYOCDQ8IZQ8 938 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 NOXO1Q8NFA2 376 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 ABHD3Q8WU67 409 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 DNAJC1Q96KC8 554 aaKnown RBP2.28□□□□□ -2.04
LINC00353-201ENST00000435401 ZNF317Q96PQ6 595 aaPredicted RBP2.28□□□□□ -2.04
LINC00353-201ENST00000435401 MICU1Q9BPX6 476 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 C11orf70Q9BRQ4 267 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 MTG1Q9BT17 334 aaPredicted RBP2.28□□□□□ -2.04
LINC00353-201ENST00000435401 NDFIP1Q9BT67 221 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 TEKT3Q9BXF9 490 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 ACTR3CQ9C0K3 210 aaPredicted RBP2.28□□□□□ -2.04
LINC00353-201ENST00000435401 SAV1Q9H4B6 383 aaPredicted RBP2.28□□□□□ -2.04
LINC00353-201ENST00000435401 SYNDIG1Q9H7V2 258 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 UBE2ZQ9H832 354 aaPredicted RBP2.28□□□□□ -2.04
LINC00353-201ENST00000435401 ACP6Q9NPH0 428 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 PXMP2Q9NR77 195 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 CCDC59Q9P031 241 aaKnown RBP2.28□□□□□ -2.04
LINC00353-201ENST00000435401 GINS2Q9Y248 185 aa2.28□□□□□ -2.04
LINC00353-201ENST00000435401 PLXNA3P51805 1871 aa2.27□□□□□ -2.05
LINC00353-201ENST00000435401 ELP1O95163 1332 aa2.27□□□□□ -2.05
LINC00353-201ENST00000435401 WDR19Q8NEZ3 1342 aa2.27□□□□□ -2.05
LINC00353-201ENST00000435401 NCBP2LA6PVI3 153 aaKnown RBP2.27□□□□□ -2.05
LINC00353-201ENST00000435401 LYRM9A8MSI8 78 aa2.27□□□□□ -2.05
LINC00353-201ENST00000435401 H7C417 338 aa2.27□□□□□ -2.05
LINC00353-201ENST00000435401 ZBTB5O15062 677 aa2.27□□□□□ -2.05
LINC00353-201ENST00000435401 CHMP2AO43633 222 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms