RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 HPSE2Q8WWQ2 592 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 OR5B2Q96R09 309 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 DDA1Q9BW61 102 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 LMAN1LQ9HAT1 526 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 B9D1Q9UPM9 204 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 KCNK6Q9Y257 313 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 COL4A3Q01955 1670 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 A0A0B4J2E0 115 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 A0A1B0GX12 115 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 ZNF878C9JN71 531 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 ARRB1P49407 418 aaPredicted RBP6.68□□□□□ -1.34
CPSF6-202ENST00000435070 CLRN1P58418 232 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 PRDX1Q06830 199 aaKnown RBP6.68□□□□□ -1.34
CPSF6-202ENST00000435070 IAH1Q2TAA2 248 aaPredicted RBP6.68□□□□□ -1.34
CPSF6-202ENST00000435070 LANCL3Q6ZV70 420 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 C2orf15Q8WU43 125 aaKnown RBP6.68□□□□□ -1.34
CPSF6-202ENST00000435070 ERGIC1Q969X5 290 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 RAB39BQ96DA2 213 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 C4orf45Q96LM5 186 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 SEC16AO15027 2179 aa6.68□□□□□ -1.34
CPSF6-202ENST00000435070 TRBV5-7A0A0A0MS05 114 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 CCL5P13501 91 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 ACY1Q03154 408 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 CLEC12BQ2HXU8 276 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 ASPHD2Q6ICH7 369 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 Q6ZNB5 142 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 OR4K15Q8NH41 348 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 NPRL2Q8WTW4 380 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 STRADBQ9C0K7 418 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 CENPMQ9NSP4 180 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 TMEM74BQ9NUR3 256 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 TMEM212A6NML5 194 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 XRCC2O43543 280 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 ABLIM3O94929 683 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 CNOT4O95628 575 aaKnown RBP6.67□□□□□ -1.34
CPSF6-202ENST00000435070 GLRA1P23415 457 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 HSD17B7P56937 341 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 TRA2BP62995 288 aaKnown RBP6.67□□□□□ -1.34
CPSF6-202ENST00000435070 NKAIN1Q4KMZ8 207 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 TMEM225Q6GV28 225 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 TMEM184AQ6ZMB5 413 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 RNF128Q8TEB7 428 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 MUCL1Q96DR8 90 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 MALSU1Q96EH3 234 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 LRFN5Q96NI6 719 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 GNRHR2Q96P88 292 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 NMES1Q9C002 83 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 SH3BGRL3Q9H299 93 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 HSF4Q9ULV5 492 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 CCL26Q9Y258 94 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 FREM3P0C091 2139 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 SCDO00767 359 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 NRG2O14511 850 aaPredicted RBP6.67□□□□□ -1.34
CPSF6-202ENST00000435070 CST4P01036 141 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 NPSP0C0P6 89 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 GGTLC2Q14390 218 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 ZNF684Q5T5D7 378 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 OR4D6Q8NGJ1 314 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 OR2A1Q8NGT9 310 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 ZNF461Q8TAF7 563 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 MCHR2Q969V1 340 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 BORCS8Q96FH0 119 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 DCBLD2Q96PD2 775 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 OR11A1Q9GZK7 315 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 MYOZ1Q9NP98 299 aaPredicted RBP6.67□□□□□ -1.34
CPSF6-202ENST00000435070 VSX1Q9NZR4 365 aaPredicted RBP6.67□□□□□ -1.34
CPSF6-202ENST00000435070 TRBV6-7A0A0A0MS04 114 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 C11orf98E9PRG8 122 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 CD1AP06126 327 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 THBS1P07996 1170 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 HKR1P10072 659 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 CHATP28329 748 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 GNG10P50151 68 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 ZNF41P51814 821 aaPredicted RBP6.67□□□□□ -1.34
CPSF6-202ENST00000435070 TLE1Q04724 770 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 HIST2H3PS2Q5TEC6 136 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 TMEM215Q68D42 235 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 TANGO2Q6ICL3 276 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 ANGPTL5Q86XS5 388 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 GALNT14Q96FL9 552 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 AQP10Q96PS8 301 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 OPN3Q9H1Y3 402 aaPredicted RBP6.67□□□□□ -1.34
CPSF6-202ENST00000435070 STARD10Q9Y365 291 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 CHD3Q12873 2000 aaKnown RBP6.67□□□□□ -1.34
CPSF6-202ENST00000435070 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.67□□□□□ -1.34
CPSF6-202ENST00000435070 A8MWP6 167 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 GPR89AB7ZAQ6 455 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 ABHD16AO95870 558 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 GPR89BP0CG08 455 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 ZNF888P0CJ79 500 aaPredicted RBP6.67□□□□□ -1.34
CPSF6-202ENST00000435070 FOXK1P85037 733 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 ENPP2Q13822 863 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 ITPRIPL2Q3MIP1 535 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 ADGRE4PQ86SQ3 457 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 LPAR4Q99677 370 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 CDC6Q99741 560 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 SAMD10Q9BYL1 202 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 PCBD2Q9H0N5 130 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 CDH23Q9H251 3354 aa6.67□□□□□ -1.34
CPSF6-202ENST00000435070 TCRBV21S2A2A0A5A6 115 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms