RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 ENTPD1P49961 510 aa11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 IKZF1Q13422 519 aa11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 EIF2B1Q14232 305 aaKnown RBP11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 DMRTC1Q5HYR2 192 aa11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 METTL11BQ5VVY1 283 aa11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 DRAM2Q6UX65 266 aa11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 FAM57BQ71RH2 274 aa11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 SLC16A9Q7RTY1 509 aa11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 C11orf53Q8IXP5 236 aa11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 PNKDQ8N490 385 aa11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 FAM216BQ8N7L0 139 aa11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 SCCPDHQ8NBX0 429 aa11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 OR4C15Q8NGM1 316 aa11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 OR8S1Q8NH09 359 aa11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 LRRC29Q8WV35 223 aa11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 WFDC12Q8WWY7 111 aa11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 KCNJ15Q99712 375 aa11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 MED4Q9NPJ6 270 aa11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 SNTG1Q9NSN8 517 aa11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 ONECUT1Q9UBC0 465 aa11.78□□□□□ -0.52
SMARCE1-205ENST00000431889 TRAV38-1A0A0B4J264 116 aa11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 DHRS12A0PJE2 317 aa11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 POM121CA8CG34 1229 aa11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 CCNB2O95067 398 aa11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 FMO3P31513 532 aa11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 OTX1P32242 354 aaPredicted RBP11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 PCK2Q16822 640 aa11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 ZNF770Q6IQ21 691 aaPredicted RBP11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 BRICD5Q6PL45 260 aa11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 C17orf107Q6ZR85 190 aa11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 ERI1Q8IV48 349 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 OR6N2Q8NGY6 317 aa11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 GATAD2BQ8WXI9 593 aa11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 ERGIC1Q969X5 290 aa11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 SGK3Q96BR1 496 aa11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 CCT8L2Q96SF2 557 aa11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 SIRPDQ9H106 197 aa11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 SIRT7Q9NRC8 400 aa11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 ACOXLQ9NUZ1 547 aa11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 MRPL15Q9P015 296 aaKnown RBP11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 TAGLN3Q9UI15 199 aa11.77□□□□□ -0.53
SMARCE1-205ENST00000431889 IGHV1-69DA0A0B4J2H0 117 aa11.76□□□□□ -0.53
SMARCE1-205ENST00000431889 P2RY10O00398 339 aa11.76□□□□□ -0.53
SMARCE1-205ENST00000431889 ACOT8O14734 319 aa11.76□□□□□ -0.53
SMARCE1-205ENST00000431889 IGHV1-69P01742 117 aa11.76□□□□□ -0.53
SMARCE1-205ENST00000431889 FAM3AP98173 230 aa11.76□□□□□ -0.53
SMARCE1-205ENST00000431889 KLRD1Q13241 179 aa11.76□□□□□ -0.53
SMARCE1-205ENST00000431889 TIGD6Q17RP2 521 aa11.76□□□□□ -0.53
SMARCE1-205ENST00000431889 WDR38Q5JTN6 314 aa11.76□□□□□ -0.53
SMARCE1-205ENST00000431889 CD276Q5ZPR3 534 aa11.76□□□□□ -0.53
SMARCE1-205ENST00000431889 DPY19L4Q7Z388 723 aa11.76□□□□□ -0.53
SMARCE1-205ENST00000431889 VMO1Q7Z5L0 202 aa11.76□□□□□ -0.53
SMARCE1-205ENST00000431889 REEP6Q96HR9 211 aa11.76□□□□□ -0.53
SMARCE1-205ENST00000431889 NIPSNAP1Q9BPW8 284 aa11.76□□□□□ -0.53
SMARCE1-205ENST00000431889 IL20Q9NYY1 176 aa11.76□□□□□ -0.53
SMARCE1-205ENST00000431889 PRKDCP78527 4128 aaKnown RBP11.76□□□□□ -0.53
SMARCE1-205ENST00000431889 ANKRD30BLA7E2S9 258 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 FSTL3O95633 263 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 HSD11B1P28845 292 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 NPY4RP50391 375 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 ZNF121P58317 390 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 KLHL12Q53G59 568 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 PDLIM3Q53GG5 364 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 OLFML2AQ68BL7 652 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 RASSF6Q6ZTQ3 369 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 PNLDC1Q8NA58 520 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 OR4F5Q8NH21 305 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 SLC22A4Q9H015 551 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 SLITRK2Q9H156 845 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 WDR13Q9H1Z4 485 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 PRDM13Q9H4Q3 707 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 BEX1Q9HBH7 125 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 RHBDD3Q9Y3P4 386 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 TCRBV5S2A0A599 114 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 ZNF878C9JN71 531 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 CDIPTO14735 213 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 GPR137BO60478 399 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 PTBP3O95758 552 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 LHBP01229 141 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 AMY2BP19961 511 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 CPT2P23786 658 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 PAX6P26367 422 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 KCNJ8Q15842 424 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 LINC01590Q5TEZ4 76 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 C1QL4Q86Z23 238 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 OR1M1Q8NGA1 313 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 H1FXQ92522 213 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 RPL3LQ92901 407 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 PAPOLGQ9BWT3 736 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 NMNAT2Q9BZQ4 307 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 OR51V1Q9H2C8 321 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 KIF17Q9P2E2 1029 aa11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 RPUSD1Q9UJJ7 312 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 SAMHD1Q9Y3Z3 626 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-205ENST00000431889 KRT36O76013 467 aa11.74□□□□□ -0.53
SMARCE1-205ENST00000431889 HMGA2P52926 109 aa11.74□□□□□ -0.53
SMARCE1-205ENST00000431889 GNGT1P63211 74 aa11.74□□□□□ -0.53
SMARCE1-205ENST00000431889 MS4A2Q01362 244 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms