RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ZNF587BE7ETH6 402 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 MNDAP41218 407 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 PMPCAQ10713 525 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 FAPQ12884 760 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 RNPS1Q15287 305 aaKnown RBP14.56□□□□□ -0.08
USHBP1-203ENST00000431146 AWAT2Q6E213 333 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 ACBD4Q8NC06 268 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 CHAC2Q8WUX2 184 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 SGK3Q96BR1 496 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 CACNG6Q9BXT2 260 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 BEX2Q9BXY8 128 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 LINC00470Q9BZP3 86 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 ZNF224Q9NZL3 707 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 UPB1Q9UBR1 384 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 POU2F3Q9UKI9 436 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 PIGLQ9Y2B2 252 aa14.56□□□□□ -0.08
USHBP1-203ENST00000431146 ATMQ13315 3056 aa14.55□□□□□ -0.08
USHBP1-203ENST00000431146 SLC22A20A6NK97 555 aa14.55□□□□□ -0.08
USHBP1-203ENST00000431146 ZNF724A8MTY0 619 aa14.55□□□□□ -0.08
USHBP1-203ENST00000431146 DHRS3O75911 302 aa14.55□□□□□ -0.08
USHBP1-203ENST00000431146 FARS2O95363 451 aaKnown RBP14.55□□□□□ -0.08
USHBP1-203ENST00000431146 LCATP04180 440 aa14.55□□□□□ -0.08
USHBP1-203ENST00000431146 MMP7P09237 267 aaPredicted RBP14.55□□□□□ -0.08
USHBP1-203ENST00000431146 CPN1P15169 458 aa14.55□□□□□ -0.08
USHBP1-203ENST00000431146 OR3A4PP47883 348 aa14.55□□□□□ -0.08
USHBP1-203ENST00000431146 UNC119Q13432 240 aa14.55□□□□□ -0.08
USHBP1-203ENST00000431146 PABPC1L2AQ5JQF8 200 aa14.55□□□□□ -0.08
USHBP1-203ENST00000431146 DRAM2Q6UX65 266 aa14.55□□□□□ -0.08
USHBP1-203ENST00000431146 PGAP1Q75T13 922 aa14.55□□□□□ -0.08
USHBP1-203ENST00000431146 ANGPTL5Q86XS5 388 aa14.55□□□□□ -0.08
USHBP1-203ENST00000431146 ZNF100Q8IYN0 542 aa14.55□□□□□ -0.08
USHBP1-203ENST00000431146 PAQR4Q8N4S7 273 aaPredicted RBP14.55□□□□□ -0.08
USHBP1-203ENST00000431146 CPEB3Q8NE35 698 aaKnown RBP14.55□□□□□ -0.08
USHBP1-203ENST00000431146 CREB3L1Q96BA8 519 aa14.55□□□□□ -0.08
USHBP1-203ENST00000431146 OR10A2Q9H208 303 aa14.55□□□□□ -0.08
USHBP1-203ENST00000431146 DPAGT1Q9H3H5 408 aa14.55□□□□□ -0.08
USHBP1-203ENST00000431146 MOV10Q9HCE1 1003 aaKnown RBP14.55□□□□□ -0.08
USHBP1-203ENST00000431146 HRASLSQ9HDD0 168 aa14.55□□□□□ -0.08
USHBP1-203ENST00000431146 NPAP1Q9NZP6 1156 aa14.55□□□□□ -0.08
USHBP1-203ENST00000431146 PRSS50Q9UI38 385 aa14.55□□□□□ -0.08
USHBP1-203ENST00000431146 ZNF503-AS2A6NEH8 195 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 APOC1P02654 83 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 TCRBP04435 133 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 GABRA1P14867 456 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 DYRK1AQ13627 763 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 OR6F1Q8NGZ6 308 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 V9GYS6 101 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 ANKRD20A5PA0PJZ0 165 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 KLK10O43240 276 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 ICMTO60725 284 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 B3GALNT1O75752 331 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 HLA-HP01893 362 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 ALDOBP05062 364 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 ERCC1P07992 297 aaPredicted RBP14.54□□□□□ -0.08
USHBP1-203ENST00000431146 VSIG8P0DPA2 414 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 NKX2-5P52952 324 aaPredicted RBP14.54□□□□□ -0.08
USHBP1-203ENST00000431146 PCBD1P61457 104 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 MRPS10P82664 201 aaKnown RBP14.54□□□□□ -0.08
USHBP1-203ENST00000431146 ECH1Q13011 328 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 SF3B4Q15427 424 aaKnown RBP eCLIP14.54□□□□□ -0.08
USHBP1-203ENST00000431146 TBRG1Q3YBR2 411 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 OR5D18Q8NGL1 313 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 CMBLQ96DG6 245 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 KLK13Q9UKR3 277 aa14.54□□□□□ -0.08
USHBP1-203ENST00000431146 TRAV17A0A0B4J275 112 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 IL32P24001 234 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 ACKR3P25106 362 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 UBE2V2Q15819 145 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 PCGF3Q3KNV8 242 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 ZNF101Q8IZC7 436 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 SLC38A6Q8IZM9 456 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 OR52H1Q8NGJ2 320 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 REEP6Q96HR9 211 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 GPER1Q99527 375 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 MCUBQ9NWR8 336 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 NKIRAS2Q9NYR9 191 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 MRPS28Q9Y2Q9 187 aaKnown RBP14.53□□□□□ -0.08
USHBP1-203ENST00000431146 ECDO95905 644 aaPredicted RBP14.53□□□□□ -0.08
USHBP1-203ENST00000431146 CCL2P13500 99 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 AGTR1P30556 359 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 QRFPP83859 136 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 GLIPR1L1Q6UWM5 242 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 DNM1P46Q6ZS02 220 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 RTN4RL2Q86UN3 420 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 C15orf40Q8WUR7 153 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 RNF122Q9H9V4 155 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 NOX3Q9HBY0 568 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 ATPIF1Q9UII2 106 aa14.53□□□□□ -0.08
USHBP1-203ENST00000431146 ANKRD11Q6UB99 2663 aaPredicted RBP14.53□□□□□ -0.08
USHBP1-203ENST00000431146 A0A1W2PP11 408 aa14.52□□□□□ -0.09
USHBP1-203ENST00000431146 WIPF3A6NGB9 483 aa14.52□□□□□ -0.09
USHBP1-203ENST00000431146 HMX3A6NHT5 357 aa14.52□□□□□ -0.09
USHBP1-203ENST00000431146 RPL36A-HNRNPH2H7BZ11 118 aa14.52□□□□□ -0.09
USHBP1-203ENST00000431146 H7C417 338 aa14.52□□□□□ -0.09
USHBP1-203ENST00000431146 RBBP9O75884 186 aa14.52□□□□□ -0.09
USHBP1-203ENST00000431146 BPNT1O95861 308 aa14.52□□□□□ -0.09
USHBP1-203ENST00000431146 CCNOP22674 350 aa14.52□□□□□ -0.09
USHBP1-203ENST00000431146 PRSS3P35030 304 aa14.52□□□□□ -0.09
USHBP1-203ENST00000431146 RCVRNP35243 200 aa14.52□□□□□ -0.09
USHBP1-203ENST00000431146 KRTAP27-1Q3LI81 207 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms