RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 USF1P22415 310 aaPredicted RBP13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 NR4A2P43354 598 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 MAGEB1P43366 347 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 MTNR1AP48039 350 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 ZNF121P58317 390 aaPredicted RBP13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 ZNF92Q03936 586 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 DCTN2Q13561 401 aaKnown RBP13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 GK2Q14410 553 aaPredicted RBP13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 SPHARQ15513 63 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 MED22Q15528 200 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 MOGQ16653 247 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 DGUOKQ16854 277 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 GLYATL3Q5SZD4 288 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 OR2T2Q6IF00 324 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 FBXW12Q6X9E4 464 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 PLEKHG7Q6ZR37 379 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 RHOUQ7L0Q8 258 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 C1orf174Q8IYL3 243 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 OR5AS1Q8N127 324 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 HAVCR1Q96D42 359 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 RNFT2Q96EX2 444 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 OR5M11Q96RB7 305 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 BPESC1Q9GZL8 116 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 MSL2Q9HCI7 577 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 YAE1D1Q9NRH1 226 aa13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 CHCHD3Q9NX63 227 aaKnown RBP13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 PURGQ9UJV8 347 aaKnown RBP13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 EXOSC1Q9Y3B2 195 aaKnown RBP13.36□□□□□ -0.27
CLK3P2-201ENST00000427566 A0A1W2PQL4 384 aaPredicted RBP13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 PLSCR5A0PG75 271 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 ZSCAN5BA6NJL1 495 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 C17orf100A8MU93 164 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 INAFM1C9JVW0 142 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 J3QW42 95 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 MYL12BO14950 172 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 NCR1O76036 304 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 ANXA2P07355 339 aaKnown RBP13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 MYL12AP19105 171 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 KITLGP21583 273 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 SERPINB10P48595 397 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 VBP1P61758 197 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 CCL8P80075 99 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 LOXL1Q08397 574 aaPredicted RBP13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 TMED1Q13445 227 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 TSTQ16762 297 aaKnown RBP13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 TMEM249Q2WGJ8 235 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 ZNF322Q6U7Q0 402 aaPredicted RBP13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 Q6ZR03 302 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 FAM57BQ71RH2 274 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 KRT77Q7Z794 578 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 OR5L1Q8NGL2 311 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 DYNC2LI1Q8TCX1 351 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 OR8B4Q96RC9 309 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 PLGRKTQ9HBL7 147 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 ISYNA1Q9NPH2 558 aa13.35□□□□□ -0.27
CLK3P2-201ENST00000427566 A0A096LNT2 108 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 VWC2LB2RUY7 222 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 ZNF670-ZNF695F2Z2N8 137 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 TBX1O43435 398 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 SPRY3O43610 288 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 TIMM8AO60220 97 aaPredicted RBP13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 CDC14BO60729 498 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 RAC2P15153 192 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 TUBG1P23258 451 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 GADD45AP24522 165 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 COL8A2P25067 703 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 ATP6V1E1P36543 226 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 RBMXP38159 391 aaKnown RBP13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 ZNF81P51508 661 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 ROM1Q03395 351 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 KRTAP1-1Q07627 177 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 POU4F2Q12837 409 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 MLLT11Q13015 90 aaPredicted RBP13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 HNRNPA0Q13151 305 aaKnown RBP13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 SPRNQ5BIV9 151 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 KCTD18Q6PI47 426 aaPredicted RBP13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 USP43Q70EL4 1123 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 ZNF679Q8IYX0 411 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 BHLHE23Q8NDY6 225 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 OR10H4Q8NGA5 316 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 PPP1R14AQ96A00 147 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 OPALINQ96PE5 141 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 TUBG2Q9NRH3 451 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 DECR2Q9NUI1 292 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 IKZF2Q9UKS7 526 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 EXOGQ9Y2C4 368 aaKnown RBP13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 TMEM14AQ9Y6G1 99 aa13.34□□□□□ -0.27
CLK3P2-201ENST00000427566 ABCA1O95477 2261 aa13.33□□□□□ -0.28
CLK3P2-201ENST00000427566 IGHV4-61A0A0C4DH41 118 aa13.33□□□□□ -0.28
CLK3P2-201ENST00000427566 J3QRE1 110 aa13.33□□□□□ -0.28
CLK3P2-201ENST00000427566 OR2T7P0C7T2 308 aa13.33□□□□□ -0.28
CLK3P2-201ENST00000427566 HSMCR30P0CW71 290 aa13.33□□□□□ -0.28
CLK3P2-201ENST00000427566 NCS1P62166 190 aa13.33□□□□□ -0.28
CLK3P2-201ENST00000427566 LSM3P62310 102 aaKnown RBP13.33□□□□□ -0.28
CLK3P2-201ENST00000427566 ZNF85Q03923 595 aa13.33□□□□□ -0.28
CLK3P2-201ENST00000427566 GDPGP1Q6ZNW5 385 aa13.33□□□□□ -0.28
CLK3P2-201ENST00000427566 CROCCP3Q8IVE0 287 aa13.33□□□□□ -0.28
CLK3P2-201ENST00000427566 OR2T27Q8NH04 317 aa13.33□□□□□ -0.28
CLK3P2-201ENST00000427566 NDNFQ8TB73 568 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms