RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 BATF2Q8N1L9 274 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 GPR148Q8TDV2 347 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 ISOC1Q96CN7 298 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 CA10Q9NS85 328 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 STUB1Q9UNE7 303 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 RHBDD3Q9Y3P4 386 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 hCG_38984A0A1B0GV85 526 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 ZNF879B4DU55 563 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 RGS9O75916 674 aaPredicted RBP11.53□□□□□ -0.56
PRPF39-202ENST00000424478 UBCP0CG48 685 aaKnown RBP11.53□□□□□ -0.56
PRPF39-202ENST00000424478 OR13C9Q8NGT0 318 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 OR14K1Q8NGZ2 314 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 TRMT10AQ8TBZ6 339 aaKnown RBP11.53□□□□□ -0.56
PRPF39-202ENST00000424478 MARS2Q96GW9 593 aaKnown RBP11.53□□□□□ -0.56
PRPF39-202ENST00000424478 SLC30A2Q9BRI3 323 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 ESRP2Q9H6T0 727 aaKnown RBP11.53□□□□□ -0.56
PRPF39-202ENST00000424478 PLEKHA1Q9HB21 404 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 ISYNA1Q9NPH2 558 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 GPR173Q9NS66 373 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 TBCCD1Q9NVR7 557 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 ATPIF1Q9UII2 106 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 GPR160Q9UJ42 338 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 ENPP5Q9UJA9 477 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 GGT3PA6NGU5 568 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 PPP3CBP16298 524 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 OR10A3P58181 314 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 ZNF704Q6ZNC4 412 aaPredicted RBP11.53□□□□□ -0.56
PRPF39-202ENST00000424478 OR10AD1Q8NGE0 317 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 LILRB1Q8NHL6 650 aaPredicted RBP11.53□□□□□ -0.56
PRPF39-202ENST00000424478 TMEM171Q8WVE6 324 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 DACH2Q96NX9 599 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 DERL3Q96Q80 235 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 DCUN1D5Q9BTE7 237 aa11.53□□□□□ -0.56
PRPF39-202ENST00000424478 E7EQL1 145 aa11.52□□□□□ -0.57
PRPF39-202ENST00000424478 H0YL77 283 aa11.52□□□□□ -0.57
PRPF39-202ENST00000424478 APOC1P02654 83 aa11.52□□□□□ -0.57
PRPF39-202ENST00000424478 CD3EP07766 207 aa11.52□□□□□ -0.57
PRPF39-202ENST00000424478 NKX6-1P78426 367 aaPredicted RBP11.52□□□□□ -0.57
PRPF39-202ENST00000424478 MALLQ13021 153 aa11.52□□□□□ -0.57
PRPF39-202ENST00000424478 Q499Y3 187 aa11.52□□□□□ -0.57
PRPF39-202ENST00000424478 YIF1BQ5BJH7 314 aa11.52□□□□□ -0.57
PRPF39-202ENST00000424478 TMEM244Q5VVB8 128 aa11.52□□□□□ -0.57
PRPF39-202ENST00000424478 METAP1DQ6UB28 335 aaPredicted RBP11.52□□□□□ -0.57
PRPF39-202ENST00000424478 PIGCQ92535 297 aa11.52□□□□□ -0.57
PRPF39-202ENST00000424478 RFT1Q96AA3 541 aa11.52□□□□□ -0.57
PRPF39-202ENST00000424478 C12orf43Q96C57 262 aaKnown RBP11.52□□□□□ -0.57
PRPF39-202ENST00000424478 MRPL37Q9BZE1 423 aaKnown RBP11.52□□□□□ -0.57
PRPF39-202ENST00000424478 MOB1AQ9H8S9 216 aa11.52□□□□□ -0.57
PRPF39-202ENST00000424478 H3BMQ9 156 aa11.52□□□□□ -0.57
PRPF39-202ENST00000424478 IGLV3-1P01715 115 aa11.52□□□□□ -0.57
PRPF39-202ENST00000424478 IGFBP2P18065 325 aa11.52□□□□□ -0.57
PRPF39-202ENST00000424478 ACHEP22303 614 aa11.52□□□□□ -0.57
PRPF39-202ENST00000424478 CA6P23280 308 aa11.52□□□□□ -0.57
PRPF39-202ENST00000424478 LOXP28300 417 aaPredicted RBP11.52□□□□□ -0.57
PRPF39-202ENST00000424478 NR2C2APQ86WQ0 139 aa11.52□□□□□ -0.57
PRPF39-202ENST00000424478 PIGTQ969N2 578 aa11.52□□□□□ -0.57
PRPF39-202ENST00000424478 REPIN1Q9BWE0 567 aaKnown RBP11.52□□□□□ -0.57
PRPF39-202ENST00000424478 ZNF275Q9NSD4 429 aaPredicted RBP11.52□□□□□ -0.57
PRPF39-202ENST00000424478 SSR3Q9UNL2 185 aa11.52□□□□□ -0.57
PRPF39-202ENST00000424478 APCP25054 2843 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 ARFGEF3Q5TH69 2177 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 A0A0U1RQV5 110 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 SC5DO75845 299 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 DHRS3O75911 302 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 PLATP00750 562 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 SDC2P34741 201 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 RAD52P43351 418 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 RGS7BPQ6MZT1 257 aaPredicted RBP11.51□□□□□ -0.57
PRPF39-202ENST00000424478 ZNF544Q6NX49 715 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 FAM169BQ8N8A8 192 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 PLPP7Q8NBV4 271 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 MYCBPQ99417 103 aaPredicted RBP11.51□□□□□ -0.57
PRPF39-202ENST00000424478 AK6Q9Y3D8 172 aaKnown RBP11.51□□□□□ -0.57
PRPF39-202ENST00000424478 ITPR2Q14571 2701 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 TRBV5-5A0A0J9YX44 114 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 CD300LBA8K4G0 201 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 ZNF850A8MQ14 1090 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 ISG15P05161 165 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 ALDH3B1P43353 468 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 SPRNQ5BIV9 151 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 ANKRD13BQ86YJ7 626 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 PAPOLGQ9BWT3 736 aaKnown RBP11.51□□□□□ -0.57
PRPF39-202ENST00000424478 NGBQ9NPG2 151 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 A0A1W2PPW3 197 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 A6NHS1 94 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 OR4A8P0C604 315 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 UBE2V2Q15819 145 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 DOK3Q7L591 496 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 SEMA6DQ8NFY4 1073 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 OR5D18Q8NGL1 313 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 NRGNQ92686 78 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 RNF115Q9Y4L5 304 aa11.51□□□□□ -0.57
PRPF39-202ENST00000424478 CHD3Q12873 2000 aaKnown RBP11.5□□□□□ -0.57
PRPF39-202ENST00000424478 A0A0B4J203 849 aa11.5□□□□□ -0.57
PRPF39-202ENST00000424478 XRCC2O43543 280 aa11.5□□□□□ -0.57
PRPF39-202ENST00000424478 GABARAPO95166 117 aa11.5□□□□□ -0.57
PRPF39-202ENST00000424478 CDRT1O95170 752 aa11.5□□□□□ -0.57
PRPF39-202ENST00000424478 NAT2P11245 290 aa11.5□□□□□ -0.57
PRPF39-202ENST00000424478 ZNF20P17024 532 aa11.5□□□□□ -0.57
PRPF39-202ENST00000424478 ADRA2CP18825 462 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms