RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 HIST1H2BNQ99877 126 aa4.38□□□□□ -1.71
ITGB1-205ENST00000423113 HIST1H2BMQ99879 126 aa4.38□□□□□ -1.71
ITGB1-205ENST00000423113 CABLES2Q9BTV7 478 aa4.38□□□□□ -1.71
ITGB1-205ENST00000423113 WWTR1Q9GZV5 400 aa4.38□□□□□ -1.71
ITGB1-205ENST00000423113 ZNF552Q9H707 407 aaPredicted RBP4.38□□□□□ -1.71
ITGB1-205ENST00000423113 PATZ1Q9HBE1 687 aaKnown RBP4.38□□□□□ -1.71
ITGB1-205ENST00000423113 NOX4Q9NPH5 578 aa4.38□□□□□ -1.71
ITGB1-205ENST00000423113 PRODH2Q9UF12 536 aa4.38□□□□□ -1.71
ITGB1-205ENST00000423113 CACFD1Q9UGQ2 172 aa4.38□□□□□ -1.71
ITGB1-205ENST00000423113 CCL27Q9Y4X3 112 aa4.38□□□□□ -1.71
ITGB1-205ENST00000423113 LSM5Q9Y4Y9 91 aaKnown RBP4.38□□□□□ -1.71
ITGB1-205ENST00000423113 A0A0A6YYH2 397 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 TGIF2-C20orf24A0A0A6YYL0 155 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 CDHR4A6H8M9 788 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 A6NJ64 397 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 DVL1O14640 695 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 FRS3O43559 492 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 DOK2O60496 412 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 SLC2A10O95528 541 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 GYPBP06028 91 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 GSTP1P09211 210 aaKnown RBP4.37□□□□□ -1.71
ITGB1-205ENST00000423113 PET100P0DJ07 73 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 ARAFP10398 606 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 IRF2P14316 349 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 SELEP16581 610 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 TYRP1P17643 537 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 AMD1P17707 334 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 LPAR6P43657 344 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 CAPZBP47756 277 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 PXNP49023 591 aaPredicted RBP4.37□□□□□ -1.71
ITGB1-205ENST00000423113 PNLIPRP1P54315 467 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 HBA1P69905 142 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 MRPS11P82912 194 aaKnown RBP4.37□□□□□ -1.71
ITGB1-205ENST00000423113 LTBQ06643 244 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 HAGHQ16775 308 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 RSPO4Q2I0M5 234 aaPredicted RBP4.37□□□□□ -1.71
ITGB1-205ENST00000423113 DCAF10Q5QP82 559 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 RPL7L1Q6DKI1 246 aaKnown RBP4.37□□□□□ -1.71
ITGB1-205ENST00000423113 RPUSD3Q6P087 351 aaKnown RBP4.37□□□□□ -1.71
ITGB1-205ENST00000423113 FAM220AQ7Z4H9 259 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 CAMKMTQ7Z624 323 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 NR2C2APQ86WQ0 139 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 FAM219AQ8IW50 185 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 ZNF676Q8N7Q3 588 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 OR5L1Q8NGL2 311 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 OR5R1Q8NH85 324 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 SFXN5Q8TD22 340 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 TSEN15Q8WW01 171 aaKnown RBP4.37□□□□□ -1.71
ITGB1-205ENST00000423113 RNF2Q99496 336 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 PDCD1LG2Q9BQ51 273 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 SLC35B3Q9H1N7 401 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 BARX1Q9HBU1 254 aaPredicted RBP4.37□□□□□ -1.71
ITGB1-205ENST00000423113 LRFN1Q9P244 771 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 ZNF346Q9UL40 294 aaKnown RBP4.37□□□□□ -1.71
ITGB1-205ENST00000423113 SDK2Q58EX2 2172 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 KMT2BQ9UMN6 2715 aaPredicted RBP4.37□□□□□ -1.71
ITGB1-205ENST00000423113 IGLV3-12A0A075B6K2 115 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 TRAV14DV4A0A0A6YYC5 116 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 TBC1D3FA6NER0 549 aaPredicted RBP4.37□□□□□ -1.71
ITGB1-205ENST00000423113 K7ERU9 68 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 TAPBPO15533 448 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 GSTZ1O43708 216 aaPredicted RBP4.37□□□□□ -1.71
ITGB1-205ENST00000423113 SEMG1P04279 462 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 EPHA1P21709 976 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 SNCAP37840 140 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 ARRB1P49407 418 aaPredicted RBP4.37□□□□□ -1.71
ITGB1-205ENST00000423113 EFNB1P98172 346 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 SRSF5Q13243 272 aaKnown RBP4.37□□□□□ -1.71
ITGB1-205ENST00000423113 DHRS2Q13268 280 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 KIR2DS3Q14952 304 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 RTP5Q14D33 572 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 HLA-BQ31612 363 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 AWAT2Q6E213 333 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 PRR27Q6MZM9 219 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 CD200R1LQ6Q8B3 271 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 COX15Q7KZN9 410 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 PRICKLE2Q7Z3G6 844 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 C17orf78Q8N4C9 275 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 ZNF709Q8N972 641 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 NECAP1Q8NC96 275 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 OR8J2Q8NGG1 315 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 LCN9Q8WX39 176 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 SCAMP4Q969E2 229 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 NEIL2Q969S2 332 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 MCHR2Q969V1 340 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 BPIFA2Q96DR5 249 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 HIST1H2BLQ99880 126 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 PLA2G12AQ9BZM1 189 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 SLC26A1Q9H2B4 701 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 ZMAT3Q9HA38 289 aaKnown RBP4.37□□□□□ -1.71
ITGB1-205ENST00000423113 LPAR2Q9HBW0 351 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 KCNE5Q9UJ90 142 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 SLC7A11Q9UPY5 501 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 IGKV1-8A0A0C4DH67 115 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 TMEM8BA6NDV4 472 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 TNFSF12O43508 249 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 SYT7O43581 403 aa4.37□□□□□ -1.71
ITGB1-205ENST00000423113 ERAL1O75616 437 aaKnown RBP4.37□□□□□ -1.71
ITGB1-205ENST00000423113 GPANK1O95872 356 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms