RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 NRG4Q8WWG1 115 aa9.6□□□□□ -0.87
PTCH1-206ENST00000421141 ST3GAL6Q9Y274 331 aa9.6□□□□□ -0.87
PTCH1-206ENST00000421141 MSTNO14793 375 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 SSX5O60225 188 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 GIFP27352 417 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 MRM1Q6IN84 353 aaKnown RBP9.59□□□□□ -0.87
PTCH1-206ENST00000421141 LCN10Q6JVE6 187 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 SFTPA2Q8IWL1 248 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 SYS1Q8N2H4 156 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 TEX29Q8N6K0 151 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 OTOSQ8NHW6 89 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 A0A1W2PR77 199 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 CLDN1O95832 211 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 HOXB5P09067 269 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 C1orf174Q8IYL3 243 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 UBQLN2Q9UHD9 624 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 TRAV38-1A0A0B4J264 116 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 NCBP2LA6PVI3 153 aaKnown RBP9.59□□□□□ -0.87
PTCH1-206ENST00000421141 WNT3P56703 355 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 CATSPERDQ86XM0 798 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 ABHD3Q8WU67 409 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 ASB10Q8WXI3 467 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 NRTNQ99748 197 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 LRP12Q9Y561 859 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 ARPC1BO15143 372 aaKnown RBP9.59□□□□□ -0.87
PTCH1-206ENST00000421141 CT45A6P0DMU7 189 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 CT45A5P0DMU8 189 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 CT45A7P0DMV0 189 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 CT45A8P0DMV1 189 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 CT45A9P0DMV2 189 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 ERGP11308 486 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 BMI1P35226 326 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 DEFA5Q01523 94 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 TGIF1Q15583 401 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 CT45A2Q5DJT8 189 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 CT45A1Q5HYN5 189 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 ZNF774Q6NX45 483 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 CT45A3Q8NHU0 189 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 CACFD1Q9UGQ2 172 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 FBXL2Q9UKC9 423 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 KRBOX4Q5JUW0 171 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 OR52W1Q6IF63 320 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 CXorf67Q86X51 503 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-206ENST00000421141 OR8B3Q8NGG8 313 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 CORO2AQ92828 525 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 OR8B2Q96RD0 313 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 ZMAT3Q9HA38 289 aaKnown RBP9.59□□□□□ -0.87
PTCH1-206ENST00000421141 LIN7CQ9NUP9 197 aaKnown RBP9.59□□□□□ -0.87
PTCH1-206ENST00000421141 AQP8O94778 261 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 RPS16P62249 146 aaKnown RBP9.59□□□□□ -0.87
PTCH1-206ENST00000421141 ATPAF1Q5TC12 328 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-206ENST00000421141 CCBE1Q6UXH8 406 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-206ENST00000421141 CALHM3Q86XJ0 350 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 SPSB1Q96BD6 273 aa9.59□□□□□ -0.87
PTCH1-206ENST00000421141 RBMX2Q9Y388 322 aaKnown RBP9.59□□□□□ -0.87
PTCH1-206ENST00000421141 RPS2P15880 293 aaKnown RBP9.58□□□□□ -0.88
PTCH1-206ENST00000421141 CA6P23280 308 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 PSG6Q00889 435 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 RDH5Q92781 318 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 AKR1E2Q96JD6 320 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 CXXC4Q9H2H0 198 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 SIGLEC7Q9Y286 467 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 ANKRD33BA6NCL7 494 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 FAHP16930 419 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 PRRX1P54821 245 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 UBE3DQ7Z6J8 389 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 TAS2R3Q9NYW6 316 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 IL20Q9NYY1 176 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 PPP1R3CQ9UQK1 317 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 LIPT2A6NK58 231 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 TSPAN4O14817 238 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 DHRS3O75911 302 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 IGFBP1P08833 259 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-206ENST00000421141 SLC9A3R2Q15599 337 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 SLC38A9Q8NBW4 561 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 OR2M3Q8NG83 312 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 OR2G2Q8NGZ5 317 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 LAMP3Q9UQV4 416 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 RCE1Q9Y256 329 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 A0A1W2PQM1 296 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 TMEM30CPA0ZSE6 113 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 HRKO00198 91 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 POU4F3Q15319 338 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 CBLN3Q6UW01 205 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 TSEN54Q7Z6J9 526 aaKnown RBP9.58□□□□□ -0.88
PTCH1-206ENST00000421141 C7orf72A4D263 438 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 ERHP84090 104 aaKnown RBP9.58□□□□□ -0.88
PTCH1-206ENST00000421141 TIAL1Q01085 375 aaKnown RBP eCLIP9.58□□□□□ -0.88
PTCH1-206ENST00000421141 FBXW9Q5XUX1 488 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 INO80CQ6PI98 192 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-206ENST00000421141 OR51D1Q8NGF3 324 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 NBASA2RRP1 2371 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 CACNA1HO95180 2353 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 LOC101059948A0A1B0GTJ6 334 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 PHLDA2Q53GA4 152 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 SPNS2Q8IVW8 549 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 OR10K1Q8NGX5 313 aa9.58□□□□□ -0.88
PTCH1-206ENST00000421141 HEYLQ9NQ87 328 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-206ENST00000421141 ATF1P18846 271 aa9.57□□□□□ -0.88
PTCH1-206ENST00000421141 SPINK2P20155 84 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms