RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 OR2AE1Q8NHA4 323 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 CHD8Q9HCK8 2581 aa18.23■□□□□ 0.51
GPC1-202ENST00000420138 PRRC2CQ9Y520 2896 aaKnown RBP18.22■□□□□ 0.51
GPC1-202ENST00000420138 IGKV1-9A0A0C4DH69 117 aa18.22■□□□□ 0.51
GPC1-202ENST00000420138 SULT1B1O43704 296 aa18.22■□□□□ 0.51
GPC1-202ENST00000420138 LCATP04180 440 aa18.22■□□□□ 0.51
GPC1-202ENST00000420138 COX5BP10606 129 aa18.22■□□□□ 0.51
GPC1-202ENST00000420138 SLC6A1P30531 599 aa18.22■□□□□ 0.51
GPC1-202ENST00000420138 ART1P52961 327 aa18.22■□□□□ 0.51
GPC1-202ENST00000420138 TNK1Q13470 666 aa18.22■□□□□ 0.51
GPC1-202ENST00000420138 RTL6Q6ICC9 239 aa18.22■□□□□ 0.51
GPC1-202ENST00000420138 VWA1Q6PCB0 445 aa18.22■□□□□ 0.51
GPC1-202ENST00000420138 ZNF584Q8IVC4 421 aa18.22■□□□□ 0.51
GPC1-202ENST00000420138 JAGN1Q8N5M9 183 aa18.22■□□□□ 0.51
GPC1-202ENST00000420138 RAB40AQ8WXH6 277 aa18.22■□□□□ 0.51
GPC1-202ENST00000420138 C1QTNF5Q9BXJ0 243 aa18.22■□□□□ 0.51
GPC1-202ENST00000420138 CNTD2Q9H8S5 307 aa18.22■□□□□ 0.51
GPC1-202ENST00000420138 LOC100289279A0A1B0GTE1 492 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 LDLRAD4O15165 306 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 ORC5O43913 435 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 IGHV1-2P23083 117 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 RAB1AP62820 205 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 DGCR2P98153 550 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 PGAP1Q75T13 922 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 TOMM5Q8N4H5 51 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 SSC4DQ8WTU2 575 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 FOXRED1Q96CU9 486 aaPredicted RBP18.21■□□□□ 0.51
GPC1-202ENST00000420138 METTL17Q9H7H0 456 aaPredicted RBP18.21■□□□□ 0.51
GPC1-202ENST00000420138 MED12LQ86YW9 2145 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 TMEM272A0A1B0GTI8 110 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 MBD3L4A6NDZ8 208 aaPredicted RBP18.21■□□□□ 0.51
GPC1-202ENST00000420138 MBD3L3A6NE82 208 aaPredicted RBP18.21■□□□□ 0.51
GPC1-202ENST00000420138 MBD3L5A6NJ08 208 aaPredicted RBP18.21■□□□□ 0.51
GPC1-202ENST00000420138 CENPXA8MT69 81 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 TNFSF13O75888 250 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 CD3GP09693 182 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 CD79AP11912 226 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 EDN3P14138 238 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 ACKR3P25106 362 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 PTH2RP49190 550 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 TATDN3Q17R31 274 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 TBRG1Q3YBR2 411 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 ATAD3CQ5T2N8 411 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 OR2A2Q6IF42 318 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 KRT74Q7RTS7 529 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 CCDC54Q8NEL0 328 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 MBD3L2Q8NHZ7 208 aaPredicted RBP18.21■□□□□ 0.51
GPC1-202ENST00000420138 UBASH3BQ8TF42 649 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 CREB3L1Q96BA8 519 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 UPRTQ96BW1 309 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 S100A16Q96FQ6 103 aaKnown RBP18.21■□□□□ 0.51
GPC1-202ENST00000420138 REEP6Q96HR9 211 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 ST6GAL2Q96JF0 529 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 ZNF75AQ96N20 296 aa18.21■□□□□ 0.51
GPC1-202ENST00000420138 RTTNQ86VV8 2226 aa18.2■□□□□ 0.5
GPC1-202ENST00000420138 GTF3C1Q12789 2109 aa18.2■□□□□ 0.5
GPC1-202ENST00000420138 TOXO94900 526 aa18.2■□□□□ 0.5
GPC1-202ENST00000420138 FAHP16930 419 aa18.2■□□□□ 0.5
GPC1-202ENST00000420138 ARR3P36575 388 aa18.2■□□□□ 0.5
GPC1-202ENST00000420138 KCNJ8Q15842 424 aa18.2■□□□□ 0.5
GPC1-202ENST00000420138 PLA1AQ53H76 456 aa18.2■□□□□ 0.5
GPC1-202ENST00000420138 CRIP3Q6Q6R5 217 aa18.2■□□□□ 0.5
GPC1-202ENST00000420138 CNEP1R1Q8N9A8 125 aa18.2■□□□□ 0.5
GPC1-202ENST00000420138 OR6K3Q8NGY3 331 aa18.2■□□□□ 0.5
GPC1-202ENST00000420138 SMIM4Q8WVI0 70 aa18.2■□□□□ 0.5
GPC1-202ENST00000420138 PLEKHA1Q9HB21 404 aa18.2■□□□□ 0.5
GPC1-202ENST00000420138 PAIP2BQ9ULR5 123 aaKnown RBP18.2■□□□□ 0.5
GPC1-202ENST00000420138 FAM215AQ9Y5M1 114 aa18.2■□□□□ 0.5
GPC1-202ENST00000420138 INMT-MINDY4F8WBC2 141 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 CDK2P24941 298 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 THBS4P35443 961 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 SRP9P49458 86 aaKnown RBP18.19■□□□□ 0.5
GPC1-202ENST00000420138 KRTCAP3Q53RY4 240 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 Q6ZT83 130 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 C10orf35Q96D05 121 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 POM121L2Q96KW2 1035 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 SORCS2Q96PQ0 1159 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 C7orf50Q9BRJ6 194 aaKnown RBP18.19■□□□□ 0.5
GPC1-202ENST00000420138 UQCC2Q9BRT2 126 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 PIGLQ9Y2B2 252 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 ALG5Q9Y673 324 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 ARHGAP21Q5T5U3 1957 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 SVILO95425 2214 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 DHRS7CA6NNS2 312 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 MTRF1O75570 445 aaKnown RBP18.19■□□□□ 0.5
GPC1-202ENST00000420138 CTAG2O75638 210 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 CNOT4O95628 575 aaKnown RBP18.19■□□□□ 0.5
GPC1-202ENST00000420138 CCL2P13500 99 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 ARSBP15848 533 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 STOMP27105 288 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 MNDAP41218 407 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 TDGF1P3P51864 188 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 BTG1P62324 171 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 ZNF92Q03936 586 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 UBE2V2Q15819 145 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 RNASE12Q5GAN4 147 aaKnown RBP18.19■□□□□ 0.5
GPC1-202ENST00000420138 KDF1Q8NAX2 398 aaPredicted RBP18.19■□□□□ 0.5
GPC1-202ENST00000420138 SPACA5Q96QH8 159 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 CHST5Q9GZS9 411 aa18.19■□□□□ 0.5
GPC1-202ENST00000420138 MOV10Q9HCE1 1003 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms