RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 RND1Q92730 232 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 SPSB1Q96BD6 273 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 FOXRED1Q96CU9 486 aaPredicted RBP5.18□□□□□ -1.58
HMGB3-202ENST00000419110 STARD4Q96DR4 205 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 LRRC46Q96FV0 321 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 WBP1Q96G27 269 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 DIRAS2Q96HU8 199 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 SORCS2Q96PQ0 1159 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 VKORC1Q9BQB6 163 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 CCDC32Q9BV29 185 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 C1QTNF5Q9BXJ0 243 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 PPIL3Q9H2H8 161 aaKnown RBP5.18□□□□□ -1.58
HMGB3-202ENST00000419110 ZCCHC4Q9H5U6 513 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 METTL17Q9H7H0 456 aaPredicted RBP5.18□□□□□ -1.58
HMGB3-202ENST00000419110 LIN7BQ9HAP6 207 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 TMEM138Q9NPI0 162 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 PLSCR4Q9NRQ2 329 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 COMMD3Q9UBI1 195 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 RABL2AQ9UBK7 228 aaPredicted RBP5.18□□□□□ -1.58
HMGB3-202ENST00000419110 EIF3KQ9UBQ5 218 aaKnown RBP5.18□□□□□ -1.58
HMGB3-202ENST00000419110 EXTL2Q9UBQ6 330 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 PLEKHB1Q9UF11 243 aaPredicted RBP5.18□□□□□ -1.58
HMGB3-202ENST00000419110 KCNN3Q9UGI6 736 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 STEAP1Q9UHE8 339 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 RABL2BQ9UNT1 228 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 PIGLQ9Y2B2 252 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 V9GYS6 101 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 BOD1L1Q8NFC6 3051 aa5.18□□□□□ -1.58
HMGB3-202ENST00000419110 DIDO1Q9BTC0 2240 aaKnown RBP5.17□□□□□ -1.58
HMGB3-202ENST00000419110 USP24Q9UPU5 2620 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 A0A0G2JNJ9 132 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 ZNF816-ZNF321PA0A0X1KG74 233 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 LOC100289279A0A1B0GTE1 492 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 A0A1B0GTI1 187 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 ZNF503-AS2A6NEH8 195 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 GGT3PA6NGU5 568 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 LMX1BO60663 402 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 HPGDSO60760 199 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 SMPD2O60906 423 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 SCGNO76038 276 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 WISP2O76076 250 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 TOXO94900 526 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 CGAP01215 116 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 INHBBP09529 407 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 SLC2A2P11168 524 aaPredicted RBP5.17□□□□□ -1.58
HMGB3-202ENST00000419110 ZNF14P17017 642 aaPredicted RBP5.17□□□□□ -1.58
HMGB3-202ENST00000419110 IGFBP3P17936 291 aaPredicted RBP5.17□□□□□ -1.58
HMGB3-202ENST00000419110 PTBP1P26599 531 aaKnown RBP eCLIP5.17□□□□□ -1.58
HMGB3-202ENST00000419110 HTR2CP28335 458 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 THBS2P35442 1172 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 DDOSTP39656 456 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 NR4A2P43354 598 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 MAGEB1P43366 347 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 ASCL1P50553 236 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 BMXP51813 675 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 RPS23P62266 143 aaKnown RBP5.17□□□□□ -1.58
HMGB3-202ENST00000419110 SPOCK1Q08629 439 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 RIPPLY1Q0D2K3 151 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 IL18Q14116 193 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 LY6DQ14210 128 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 OR8B8Q15620 311 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 SLC25A35Q3KQZ1 300 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 TIMM23BQ5SRD1 257 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 TRIQKQ629K1 86 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 PLCXD3Q63HM9 321 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 AWAT2Q6E213 333 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 METAP1DQ6UB28 335 aaPredicted RBP5.17□□□□□ -1.58
HMGB3-202ENST00000419110 FAM131AQ6UXB0 335 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 UTS2BQ765I0 119 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 CCDC190Q86UF4 302 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 NR2C2APQ86WQ0 139 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 DOLPP1Q86YN1 238 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 PLPP7Q8NBV4 271 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 DNAAF1Q8NEP3 725 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 CSNK2A3Q8NEV1 391 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 OR56B2PQ8NGI1 322 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 OR51A2Q8NGJ7 313 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 OR14K1Q8NGZ2 314 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 FGFBP3Q8TAT2 258 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 EDARADDQ8WWZ3 215 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 PPP1R14AQ96A00 147 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 SPSB4Q96A44 273 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 PHF21AQ96BD5 680 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 FGGYQ96C11 551 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 ORAI1Q96D31 301 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 MUCL1Q96DR8 90 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 ADAT3Q96EY9 351 aaPredicted RBP5.17□□□□□ -1.58
HMGB3-202ENST00000419110 BOD1Q96IK1 185 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 POM121L2Q96KW2 1035 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 CMTM3Q96MX0 182 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 GPER1Q99527 375 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 UQCC2Q9BRT2 126 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 PAPOLGQ9BWT3 736 aaKnown RBP5.17□□□□□ -1.58
HMGB3-202ENST00000419110 ABCB9Q9NP78 766 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 RHBDL2Q9NX52 303 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 PTTG3PQ9NZH4 202 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 ZNF629Q9UEG4 869 aaPredicted RBP5.17□□□□□ -1.58
HMGB3-202ENST00000419110 Q9UFV3 132 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 SPATA2Q9UM82 520 aa5.17□□□□□ -1.58
HMGB3-202ENST00000419110 RTTNQ86VV8 2226 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms